Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0127 |
Symbol | |
ID | 6407770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 140704 |
End bp | 141528 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642710036 |
Product | metallophosphoesterase |
Protein accession | YP_001989165 |
Protein GI | 192288560 |
COG category | [R] General function prediction only |
COG ID | [COG1409] Predicted phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.500337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTCG TCGTTCTCAC CGATACGCAT TTCGTCGCCC GCGGTCGCCG CATCTACGGG CTCGACCCGG CCGAACGGCT CAGTGCCGCG GTGGCGCGGA TCAACCGCGA GCATCCCGAC ATCGCTTTCG TGATCGTCAC CGGCGATCTG GCGCATTGGG GCGAGGAGCC GGCTTACGAC AATCTGGCTT CGGTGCTGGC GGGATTGCGG GCGCCGACCA TCCTGATGAT GGGCAATCAC GACAAGCGCG AGGCCTTCGC CAAATTCTTC CCCGGCGTGC CGCGCGATGC GAGCGGCTTC GTCCAGACCG TGCAGGTGTT CGAGGCGGCG ACGATCGTCA CGCTGGACAC GCTGAACGAG GCCGCGCCAA ACCATGAAGG GTTGTTGTGC GAGGCGCGGC TGGCGTTCCT CGAACACGCG CTGGCGGAAG CTCCGGCCGA CCGTCCGCTG CTGCTGTTCC AGCATCACCC GCCGTTCGAC ACCGGGCTGC GCTACATGGA TACGATCCGG CTCGCCAATC CGGACGCCGA ATGGGAGGTG ATCGCCCGCA CCCGCAAGCC GGACTATCTG TTCATGGGGC ACCTGCACCG GCCCATCTCG GGCGTGTGGC GCGGCATCCC GTTTCACATC CAGCGCGGGC TGGCGCATCA GGTCGCGTTC GATCTGGTGG CCGAGGGCCA CATCCCCGGC TCGCACGAGC CGCCGGACTA CGCCCATGTC AGCGTCGAGG CCGATCGCAT CGTGATCCAC CAGTGCTCGT TCATGTATGA CGGGCCGCTG TTCTCGCTGC ACGACAGTGT CGCGCTGCAC CGCGTCTCGT TCTGA
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Protein sequence | MKFVVLTDTH FVARGRRIYG LDPAERLSAA VARINREHPD IAFVIVTGDL AHWGEEPAYD NLASVLAGLR APTILMMGNH DKREAFAKFF PGVPRDASGF VQTVQVFEAA TIVTLDTLNE AAPNHEGLLC EARLAFLEHA LAEAPADRPL LLFQHHPPFD TGLRYMDTIR LANPDAEWEV IARTRKPDYL FMGHLHRPIS GVWRGIPFHI QRGLAHQVAF DLVAEGHIPG SHEPPDYAHV SVEADRIVIH QCSFMYDGPL FSLHDSVALH RVSF
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