| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0126 |
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| Symbol | |
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| ID | 6407769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 139057 |
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| End bp | 140697 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710035 |
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| Product | TrkA-N domain protein |
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| Protein accession | YP_001989164 |
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| Protein GI | 192288559 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.379824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAGCA TCGTCCGCCT CGGGCTCTCC CGGCTGCGCC CACCGCTGAT CCTGCTGGCG
TTGGTATTCG CGGCGTCGAC GCTCGGGCTG ATGCTGATCC CTGGGGTCGA TGCTCAAGGT
CACCCGTGGC GGATGACGCT GTTCGACGCG TTCTATTTCG TCACCTACAC GGCGACCACG
ATCGGCTTCG GCGAGCTGCC GCATCCGTTC ACCAACCAGC AGCGTGGCTT CGTCACCGTC
ATCATCTATC TGTCGGTGAT CGGCTGGGCG TGGCTGCTCG GTTCGCTGCT CAGCCTGGTC
CAGGAAAAGG CGTTTCAGCA GGCGCTGGTC GACCGCCGGT TTCGCCGCGC GGTCGAGAAG
CTCGATCAGC CATTCTATCT GGTGTGCGGG CTCGGCGACA CCGGCATGAC GGTGGTGCAC
GCCCTGCGTC AGCTCGGCTG CCGGCTGATC GCGATCGACA AGGACGAGCG CACGGTGCAG
CAGCTCGAAA TCGAGGGGCT GAACGGCAAA GCGCCGGCGC TGATTGCCGA CGCTCGCTCA
CCGGAGACGC TGACGGCCGC CGGGCTGATG AAGGCAGAAT GCAAAGGCGT GCTGACGCTG
TGCAACGACG ATGAGGTCAA TCTCGCCGTC GCGATCACGG CTTCGATCCT CCGGCCGGGC
CTGCCGGTGA TCGGCCGTGC CGACACGTCG GCGACGGCCG CGTCGATGAG TTCGCTCGGC
ACGCACCGGG TCATCAATCC GTTTCGCGAG TTCGCCGAAC ACCTGACGCT GGCGATGCGG
GCACCGGACG TCTATCGGCT GATCGCCTGG CTGACCAGCG CGCCCGGCGC CTACCTGTTT
CCGAGCGCGC CGGCGCGGAT GCCGGCCGCA CCCGGCCATT GGATCGTGTG CGGCTACGGC
CGGTTCGGCC GCGAAGTGGT GGCCGCCGTG CAGCGCGGTG GCTTCACGTC GGCGGTGATC
GATCCGGTCG GTTCACGGAT CGACGGTCAT CACGCGGTCC ACGGCCGCGG CGCAGATGTT
GCGGCGCTGC ACGAAGCCGG CATCGGCCAT GCGTCAGGTA TCGTCGCCGG CACCGACGAT
GACGCCGAAA ATCTGGCGAT CGCGCTGGCG GCGCGGCGGC TCAAGCCCGA GATCTTCGTG
ATCACCCGGC AGAACCAGCG CTCTAGCCGG ATGCTGTTCG CCAAGCTCGG CGCCGACATC
ACCATGGTGC CGAGCGAGAT CATCGCCAAT CAGTGTCTGG CCGCGCTGCG CACGCCGCTG
CTGGCAGACT TCCTCGAAGC CGCACGCCAC CAGGACGCGT TCTGGGCGTT CACGCTGTCG
GAGCGGCTGC GCGCCGCGCT CGGCAACGAG ACGCCGCAGT TCTGGAGCAC GGTGCTCGAC
GCCGACCACG CACCGAACCT AGTCGGCAGC GACGGCGCGC TGAAACAGCC GCTGACCGTG
GCCGAGCTTT GCGTCGATCC AGAGCACCAG GACGCCGCGC ACCCGCTGCG GCGGCGCGCG
ATCGTGCTAC GGCTGATCCG AGGCGATAGC ACGATCGAGA CGCCCGCAGA CGATGCTGTC
CTGCAGCCCG GCGACACGCT GCTGTGCGTC GGCTCCGCCG CCGTCCGTGC AACACAGCAG
CGGCGGCTCG GAGGCCGCTG A
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| Protein sequence | MRSIVRLGLS RLRPPLILLA LVFAASTLGL MLIPGVDAQG HPWRMTLFDA FYFVTYTATT
IGFGELPHPF TNQQRGFVTV IIYLSVIGWA WLLGSLLSLV QEKAFQQALV DRRFRRAVEK
LDQPFYLVCG LGDTGMTVVH ALRQLGCRLI AIDKDERTVQ QLEIEGLNGK APALIADARS
PETLTAAGLM KAECKGVLTL CNDDEVNLAV AITASILRPG LPVIGRADTS ATAASMSSLG
THRVINPFRE FAEHLTLAMR APDVYRLIAW LTSAPGAYLF PSAPARMPAA PGHWIVCGYG
RFGREVVAAV QRGGFTSAVI DPVGSRIDGH HAVHGRGADV AALHEAGIGH ASGIVAGTDD
DAENLAIALA ARRLKPEIFV ITRQNQRSSR MLFAKLGADI TMVPSEIIAN QCLAALRTPL
LADFLEAARH QDAFWAFTLS ERLRAALGNE TPQFWSTVLD ADHAPNLVGS DGALKQPLTV
AELCVDPEHQ DAAHPLRRRA IVLRLIRGDS TIETPADDAV LQPGDTLLCV GSAAVRATQQ
RRLGGR
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