Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0115 |
Symbol | |
ID | 6407758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 127157 |
End bp | 127945 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642710024 |
Product | protein of unknown function DUF81 |
Protein accession | YP_001989153 |
Protein GI | 192288548 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.117057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGAGC TGATCGCCGA GGCGTCTGCG AGTTTCCTGT CGACGCTGCC GTCGCCGATG GCGATCGTGG GCGTGCTGAG CGCGGTCCTC GCGGCCGCCC TGCTGCGCGG CTTCACCGGG TTCGGCTTCG CGCTCGCTGC AGTTCCACTG ATGGGCATGT TCATGCCGCC GGCGAAGGCG GTGCCGGTCG CCGTGCTGCT GCAACTGCTC GGCGGCCTCA ATGATCTTCG CCGCAACCAT CGTGATGCCC ACTGGGCGTC ACTGCGCTGG CTGATCGTCG GCGCGGTGAT CGGGTCGCCG ATCGGAGCGC TGGCACTCAG CGTTGCGCCG GCGCCGGTGG CACGGATCGT GATCGCGACC ATCACGGCCG CGGCGGTGGT CGTGCTCGGC CGCGGCTTTG CGATCGAGAA GATTCCATCG CGGCCGGTCA CGACGGCGGT CGGCATGTTG TGCGGTCTGT TCAACGGCCT CGCCGCGATG CCGAGCCCGC CGGCGATCGT GTACTACATG TCGGGGCCGT TTCGCGCGGT CGCGGTGCGC GCCTCGCTGT TGGTGTTCTT CCTTGCCACC TCGATCGCCG GTTTCACGAG CATTGCGCTG GTCGGCCTTG CGACCGTGAA TGTGCTGTGG CTGGCCGCGA TGGCGCTGCC GGTGATGATG CTCGGGACCT GGATCGGCGA ACAGGGTTTC CGCCGCGGCA CCGAGCGGCT GCATCGCCGC GTCTCCATCG CCAGCCTCGG CGGCGTCGCG CTGCTGAGCG CCGCGAAGGG GCTCTCCGAG CTGATGTGA
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Protein sequence | MHELIAEASA SFLSTLPSPM AIVGVLSAVL AAALLRGFTG FGFALAAVPL MGMFMPPAKA VPVAVLLQLL GGLNDLRRNH RDAHWASLRW LIVGAVIGSP IGALALSVAP APVARIVIAT ITAAAVVVLG RGFAIEKIPS RPVTTAVGML CGLFNGLAAM PSPPAIVYYM SGPFRAVAVR ASLLVFFLAT SIAGFTSIAL VGLATVNVLW LAAMALPVMM LGTWIGEQGF RRGTERLHRR VSIASLGGVA LLSAAKGLSE LM
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