Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0107 |
Symbol | |
ID | 6407750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 116974 |
End bp | 117930 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642710016 |
Product | cobalamin synthesis protein P47K |
Protein accession | YP_001989145 |
Protein GI | 192288540 |
COG category | [R] General function prediction only |
COG ID | [COG0523] Putative GTPases (G3E family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0640379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCAG CATCCGCGAC CATTTCAGTC ACGGTAATCG GCGGCTTTCT CGGCGCGGGC AAAACCACCT TCGTCAATCA CCTGCTGCGC AGCGGCGGCC CTCGGACGGC GGTGCTGGTC AACGATTTCG GCGAGGTCAA TGTCGACGCG ACACTGATCC AGAGTCACGA CGGCACCACG ATGACGCTGA CCAATGGCTG CATCTGCTGC AGCATCGGCA CCAGCTTCAT CGACACGATG TGCCAGGTGC TCGACGCTGC GGTGCCGTTT GAGCGGATCG TGATCGAAGC CTCCGGGGTC GGCGATCCGT GGAAGATCGC GGAAATTGCG CTGATCGAAC CGTCGCTGCG GCTCGACCGG GTGATCGTGT TGGCCGATGC CAGCCGGATC GCGCAACTGA TCGAGGATTC CAAGGTCGGC GACACCGTGC GCGGCCAGTT TGAGCGCTGT GACATTGTCC TGCTGAACAA GACCGATCTG GTGAATGCCG AGGCTCTGAC TGCTGCGCGC ACCGCGGTAC GAAGTCTGCG CCTGGACGTG GGTATCGTCG CAACCGCGCA AGGCGCGATG CCGACGCTGG CAGAGCTAAA GACGGCTGCG TCGTCGAGCG GTTTCCGAGC CGACGCAGTT GATGCCGCGG CGATCGATCA CGGCGCGACC TTCAAGAGCT GGGCGTATCG CCGCGCCGGC CGGTTCGATC GCGTCCGGCT CGCCTGTGCG GTCGATAAGC TGCCGCCGCA GCTATTGCGG CTGAAGGGGT CCTGTCGCCT CGCCGGCGAA GACGACGTCA AAGTGTTTCA GATGGTCGAG AGCGTCTGGA GCCTGTCGCC GGCCGATGCC GGGCCGGTCG AGCCCGGCAT CGTGCTGGTC GGCGTCGGCA CCGCCGATCT GCCGCCGCCG GCCGAACTCG ACGCGATCCT CGACCGCGCT TTGGCGCCGG CCGGAGCGCT GTCGTGA
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Protein sequence | MTAASATISV TVIGGFLGAG KTTFVNHLLR SGGPRTAVLV NDFGEVNVDA TLIQSHDGTT MTLTNGCICC SIGTSFIDTM CQVLDAAVPF ERIVIEASGV GDPWKIAEIA LIEPSLRLDR VIVLADASRI AQLIEDSKVG DTVRGQFERC DIVLLNKTDL VNAEALTAAR TAVRSLRLDV GIVATAQGAM PTLAELKTAA SSSGFRADAV DAAAIDHGAT FKSWAYRRAG RFDRVRLACA VDKLPPQLLR LKGSCRLAGE DDVKVFQMVE SVWSLSPADA GPVEPGIVLV GVGTADLPPP AELDAILDRA LAPAGALS
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