Gene Rpal_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0107 
Symbol 
ID6407750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp116974 
End bp117930 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content66% 
IMG OID642710016 
Productcobalamin synthesis protein P47K 
Protein accessionYP_001989145 
Protein GI192288540 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0640379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCAG CATCCGCGAC CATTTCAGTC ACGGTAATCG GCGGCTTTCT CGGCGCGGGC 
AAAACCACCT TCGTCAATCA CCTGCTGCGC AGCGGCGGCC CTCGGACGGC GGTGCTGGTC
AACGATTTCG GCGAGGTCAA TGTCGACGCG ACACTGATCC AGAGTCACGA CGGCACCACG
ATGACGCTGA CCAATGGCTG CATCTGCTGC AGCATCGGCA CCAGCTTCAT CGACACGATG
TGCCAGGTGC TCGACGCTGC GGTGCCGTTT GAGCGGATCG TGATCGAAGC CTCCGGGGTC
GGCGATCCGT GGAAGATCGC GGAAATTGCG CTGATCGAAC CGTCGCTGCG GCTCGACCGG
GTGATCGTGT TGGCCGATGC CAGCCGGATC GCGCAACTGA TCGAGGATTC CAAGGTCGGC
GACACCGTGC GCGGCCAGTT TGAGCGCTGT GACATTGTCC TGCTGAACAA GACCGATCTG
GTGAATGCCG AGGCTCTGAC TGCTGCGCGC ACCGCGGTAC GAAGTCTGCG CCTGGACGTG
GGTATCGTCG CAACCGCGCA AGGCGCGATG CCGACGCTGG CAGAGCTAAA GACGGCTGCG
TCGTCGAGCG GTTTCCGAGC CGACGCAGTT GATGCCGCGG CGATCGATCA CGGCGCGACC
TTCAAGAGCT GGGCGTATCG CCGCGCCGGC CGGTTCGATC GCGTCCGGCT CGCCTGTGCG
GTCGATAAGC TGCCGCCGCA GCTATTGCGG CTGAAGGGGT CCTGTCGCCT CGCCGGCGAA
GACGACGTCA AAGTGTTTCA GATGGTCGAG AGCGTCTGGA GCCTGTCGCC GGCCGATGCC
GGGCCGGTCG AGCCCGGCAT CGTGCTGGTC GGCGTCGGCA CCGCCGATCT GCCGCCGCCG
GCCGAACTCG ACGCGATCCT CGACCGCGCT TTGGCGCCGG CCGGAGCGCT GTCGTGA
 
Protein sequence
MTAASATISV TVIGGFLGAG KTTFVNHLLR SGGPRTAVLV NDFGEVNVDA TLIQSHDGTT 
MTLTNGCICC SIGTSFIDTM CQVLDAAVPF ERIVIEASGV GDPWKIAEIA LIEPSLRLDR
VIVLADASRI AQLIEDSKVG DTVRGQFERC DIVLLNKTDL VNAEALTAAR TAVRSLRLDV
GIVATAQGAM PTLAELKTAA SSSGFRADAV DAAAIDHGAT FKSWAYRRAG RFDRVRLACA
VDKLPPQLLR LKGSCRLAGE DDVKVFQMVE SVWSLSPADA GPVEPGIVLV GVGTADLPPP
AELDAILDRA LAPAGALS