| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0104 |
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| Symbol | |
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| ID | 6407747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 113369 |
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| End bp | 114277 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710013 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001989142 |
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| Protein GI | 192288537 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.217904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGA TGGAGTCTTC GCTCGCGATG GCACAGAAGC CCCTTCCCAG CGTCAGCAAA
GTGCCGAAGG CTGTCTCGCC AGCCCGGGCT GCGCTGCGCC AGTTCATGAA GAGTCCGTCC
GGCGTCGCCG GCGCACTCCT GCTCCTGCTG CTGCTCGCCG GCACCGCGCT CGGCCCGTGG
CTGCATCCGG TCGATCCGCT CGACATCGTC GGCCTGCCGT TTGCCGCGCC GGCGGCCGAT
GCTCCGCTCG GCACCGACTA TCTTGGCCGC GACGTGCTGG CCGGGCTGAT CTATGGCGGC
CGGGCGACGC TGACGGTGGG CGCCGTGGCG GCGCTGATCA CGATCGTGAT CGGAGTCACC
GTCGGAGCGC TTGCCGGCTT CTTCGGCGGC TGGGTCGATG CGCTCCTGGT CAAGATCGCC
GAGTTCTTTC AGGTGCTGCC GCCGCTGCTG TTTGCAATGG TGCTGGTGAC GCTGTTCGGC
CCCAAGCTGT CGACCATCAC GCTGGCGATC GGCGCGGTGA GCTGGACCTC GGCCGCGCGG
TTGACGCGCG CCGAATTCAT GCGGCTGCGG GATCTCGATT TCATCAAGGC CTCGCGCGCC
GCCGGTGCCG GCAGTCTGCA TCTGATCCTG CGCGTGGTGC TGCCGAATGC GCTGCCGCCG
ATTATCGTGT CGGCGACGCT GGCGATCGGC ACCGCGATCC TGTTCGAGGG AGGCCTCAGC
TTCCTCGGTC TCGGCGATCC CAACACCATG AGCTGGGGCC TGATGATCGG CCAGAACCGC
AACTACGTGC TCGACGCCTG GTGGGCGGTG ACGTTCCCCG GCGCCGCGAT CTTTCTTGCC
GTGCTCGCGG TCAGCCTGGT CGGCGACGGC GTCAACGATG CGGTCAATCC GCGCCTGCGG
CGGAGGTGA
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| Protein sequence | MSTMESSLAM AQKPLPSVSK VPKAVSPARA ALRQFMKSPS GVAGALLLLL LLAGTALGPW
LHPVDPLDIV GLPFAAPAAD APLGTDYLGR DVLAGLIYGG RATLTVGAVA ALITIVIGVT
VGALAGFFGG WVDALLVKIA EFFQVLPPLL FAMVLVTLFG PKLSTITLAI GAVSWTSAAR
LTRAEFMRLR DLDFIKASRA AGAGSLHLIL RVVLPNALPP IIVSATLAIG TAILFEGGLS
FLGLGDPNTM SWGLMIGQNR NYVLDAWWAV TFPGAAIFLA VLAVSLVGDG VNDAVNPRLR
RR
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