Gene Rpal_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0097 
Symbol 
ID6407740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp104632 
End bp105279 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content65% 
IMG OID642710006 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001989135 
Protein GI192288530 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.56928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGCC CCCGTAAGCA GCAAGCCATC GATCCGAATG GTGAAAACCG CAAGCTCCGA 
CAGGTGCTCG CCGCTGCCCG AAAACTGTTC GCCGATCACG GCTTCGACGT CACCAGCATG 
GACGCGATCG CCCGCGAGGC CGGGGTGTCG AAGGCCACGC TGTATGTGCA CTTCGCCAGC 
AAGGATGCGC TGCTGCTGGC GCTTGTCGAT GACGAATGCC GCAACTTCGG GCCGCAAATG 
CTGTGGCAGC CCGACGGGCA GCCGATCGAG CTGGAGCCGG CGCTGCGCGC CATCGCCCGC 
GGCTACACCT CGTTCTTCCT CGACGACCGC GGACTCAAGT TGCACCGGCT GGTGATGAGC 
AACGCCGCGC GGTTTCCGCA AATGGCGGCG GTGTTCATGG CGGCCGGGCC GCGCCGCTGC 
GAGGAGGAGG TCGCGAATTT TCTCCGTGCC GCGGTGGCGC AACAGCTCCT CACCATCCCG 
GATATCGGCC TCGCCGCAGT CCAGTTTCTC AGCCTCGTGC AAGGCCGGCT GCAGCTGCAA 
TGGGAATTGC AGCTCGGCCG TCCCAGCGAA GCCGACGTTC AAGCACTGAT CGACGGCGGG 
ATTCGCGTGT TTCTCACCGC CTATCGCAAC CCTGAAGTCT CATCATGA
 
Protein sequence
MPRPRKQQAI DPNGENRKLR QVLAAARKLF ADHGFDVTSM DAIAREAGVS KATLYVHFAS 
KDALLLALVD DECRNFGPQM LWQPDGQPIE LEPALRAIAR GYTSFFLDDR GLKLHRLVMS 
NAARFPQMAA VFMAAGPRRC EEEVANFLRA AVAQQLLTIP DIGLAAVQFL SLVQGRLQLQ 
WELQLGRPSE ADVQALIDGG IRVFLTAYRN PEVSS