| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0088 |
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| Symbol | |
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| ID | 6407731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 97634 |
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| End bp | 98980 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642709997 |
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| Product | Peptidoglycan-binding domain 1 protein |
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| Protein accession | YP_001989126 |
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| Protein GI | 192288521 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCGA TGCTGGCTGC AACCCTGATC GTCGCCGGTG CCGCCACCCT GCCGGTGCAT
GGCGCCCACG CCGCACCGCC GAAACAGGCC GCCGCTGCGC CTCCGGCGGC GCAGACGCCT
GCGGAGACCG CCAAAACGCT GGCGCAGGCG GAGCGCCAGG CGATCCAGTC GGATCTTGCC
TGGACCGGCG ATTACAACGG CCTGATCAAC GGCGAGGTGT CCGATCGGAT GATCGCGGCG
ATCAAGCAGT TCCAGACCAA CCAGGGTCAC AAGCCGACCG GCGTGCTCAA TCCGCAGGAG
CGCGGGCAAC TCGCCGCGGC GGCGCGCAAG CTGCAGGCCA GCGTCGGCTG GAAGCTGGTG
GCCGATCCGG TCACCGGCGC ACGGATCGGC GTGCCGACCA AACTGGTGCC GCAGCAAGCG
TCCGATGCCG GCGGCACCCG CTGGAGTTCC TCCACCGGCA CGATCCAGGT CGCGCTGTCG
CGGCGCAAGG AGGCGGACCT CTCGATCGCC AAACTCGCCG AGCAGGAAAA GAAGCAGCCT
GGCCGCAAGG TCGAATACAG CGCGGTCCGG CCCGACTTCT TCGTGCTGTC GGGCACCCAG
GGTCAGAAGA AGTTCTACAT CCGCGGCAGC TTCAAGAACG CCGAGGTGCG GATCCTCACC
GTGATGTACG ATCAGGCCAC CGAAGGCACG ATGCAGCCGG TCGTGGTGGC GATGTCGAGC
GCCTACGATC CGTTTCCGGG CGGCGTCCAG GCCGGCCCAC CGCCGCGCAA GAAGGTCGAA
TATTCGACCG GCACGATCGT CGGCGCCGAT GGTGCGATCC TGGCCGATCG CGAGGCGGTC
GAGGGCTGTC TGTCGATCGT TGTTGCGGGT TACGGTCCTG CCGATCTGGC CGATCGCAGC
AAGGAGCACG AGCTGGCGCT GCTGCGGATC TACGGCGCGT CCGAGCTCAA GCCGCTGCCG
ATCGGCAGCG GTGCTGCCAA GCCAGGAGCG GTCGAGATCA CCGGCGTCGC CGATCCGCAG
AGCCAGGGCG GCGGCGCTGC CGTCACCACC GTCAAGGCGC AGCTCACCGC AGCCGTCACC
ACCGACGGTT TGATAGTAAC GCCGCCGCCG AGCCTCGGCT TTTCCGGTGC GCCGGCCCGA
GATGCGGACG GGCGTTTCGC GGGGCTGACG ACGCTGCGTC TGCCACTGGT CGCAGGAGCG
GCTGAGAGCG CTGCGCCGCC GCAGGCGACC TTGATCACCG CCGACACCGT CCGCAGCTAT
CTCACCGGCG TCGGCGTGAA GCCGGTCGAA GGTACCACCA AGGATCCCAA AGCGAGCGTC
GTCCGCGTGA TCTGCGTACG GAAGTAA
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| Protein sequence | MRSMLAATLI VAGAATLPVH GAHAAPPKQA AAAPPAAQTP AETAKTLAQA ERQAIQSDLA
WTGDYNGLIN GEVSDRMIAA IKQFQTNQGH KPTGVLNPQE RGQLAAAARK LQASVGWKLV
ADPVTGARIG VPTKLVPQQA SDAGGTRWSS STGTIQVALS RRKEADLSIA KLAEQEKKQP
GRKVEYSAVR PDFFVLSGTQ GQKKFYIRGS FKNAEVRILT VMYDQATEGT MQPVVVAMSS
AYDPFPGGVQ AGPPPRKKVE YSTGTIVGAD GAILADREAV EGCLSIVVAG YGPADLADRS
KEHELALLRI YGASELKPLP IGSGAAKPGA VEITGVADPQ SQGGGAAVTT VKAQLTAAVT
TDGLIVTPPP SLGFSGAPAR DADGRFAGLT TLRLPLVAGA AESAAPPQAT LITADTVRSY
LTGVGVKPVE GTTKDPKASV VRVICVRK
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