| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0086 |
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| Symbol | ubiE |
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| ID | 6407729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 95702 |
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| End bp | 96463 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642709995 |
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| Product | ubiquinone/menaquinone biosynthesis methyltransferase |
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| Protein accession | YP_001989124 |
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| Protein GI | 192288519 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGAGC CGGGCGAGAC CACGCATTTC GGCTATCGCG ACGTTCCGCT GGACGAGAAG
CAGACGCTGG TCAACGACGT GTTTCACAGC GTCGCCGGCC GCTACGACCT GATGAACGAT
CTGATGTCGG GCGGCATGCA CCGGTTGTGG AAGGACGTGA TGATCACGAC CCTCAACCCG
CCGCGTGACG ACACGCCGTT CCGGCTGCTC GACGTTGCCG GCGGCACCGG CGACATCTCG
TTCCGTGCCG CCAAAGCCTC GGGCGCCGGC TTTCACTCCA CCGTCTGCGA CATCAACACC
GATATGCTCG AAGTCGGCCG CCAGCGTGCG GTCGAGCGCA ATCTCGACGA CAAGGTTGAT
TTCGTCGAGG GCAATGCCGA GAGCCTGCAG TTCGACGATC GCAGCTTCGA CGCCTACACT
ATCGCGTTCG GCATCCGGAA CGTGCCGCGG ATCGATCTGG CGCTGAAGGA GGCCTATCGC
GTTTTGAAGC CGGGCAGCCG TTTCCTGTGC CTGGAGTTCT CGTCCGTCGA TGTGCCCGGC
CTGTCCAAGC TGTACGATCT GTTCTCATTC AAGGTGATCC CGGAGATCGG CCGCGTCGTC
ACCGGCGATG CCGACAGCTA TCAGTACCTG GTCGAATCGA TCCGCAAATT CCCTAAGCCG
TATGATTTCG CCGAGATGAT GCGCGACGCC GGCTTTGCGC GCGCCAACTG GCAGGTGATG
AGCGGCGGCA TCGTCGCGCT GCATTCGGGC TGGCGTTTGT GA
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| Protein sequence | MTEPGETTHF GYRDVPLDEK QTLVNDVFHS VAGRYDLMND LMSGGMHRLW KDVMITTLNP
PRDDTPFRLL DVAGGTGDIS FRAAKASGAG FHSTVCDINT DMLEVGRQRA VERNLDDKVD
FVEGNAESLQ FDDRSFDAYT IAFGIRNVPR IDLALKEAYR VLKPGSRFLC LEFSSVDVPG
LSKLYDLFSF KVIPEIGRVV TGDADSYQYL VESIRKFPKP YDFAEMMRDA GFARANWQVM
SGGIVALHSG WRL
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