| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0082 |
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| Symbol | |
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| ID | 6407725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 89441 |
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| End bp | 91954 |
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| Gene Length | 2514 bp |
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| Protein Length | 837 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642709991 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001989120 |
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| Protein GI | 192288515 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGGCG TATTGGGGTC CATACGTCGG ACCAGTCTGT CGTGCACCTC CCTGGTGCAT
GGTTTGGCTG GGACGGCCGT GATGGTCGCG TCGTCGCCGG CGCGAGCCGC GGACGATCAC
CTGGCCGCCA TCACGTCGTC GCTGCTGCTG GATCTCAACC GCCACGAGAT GATGACGTTG
ATCATCGCGC TCGCGGCGCT GGGCTTTTCG GTGATGTCTG CGATCATGCT GGTGCGGACG
CGGCAGCGCG CGGTTGCGCG CGAAGCGGGG CTGCGCGCCG ACCTGCAGGG GCTGCAGGCG
GAGTCTGATC GTTTCCAGGC GCTGCTGTTC GCCGAGCCGC AAGTGCTGAT CTCTTGGGCG
GCTGGTGACA GCCGGCCGCA GGTCAGCGGC GACACCGCGC TGTTCCTGCC GCTGGAGACG
CAGAGTCGCC AACCGCAACG AGTGCTGGCG TTCGGAACCT GGTTGCCGCC CGAGCCGGCG
CTGCAAATGG ATCACGCAGT CGATGCGCTG CTCGACAAGG GCGAAGGCTT TCTGCTGCAG
CTCGTCACCT CGAACGGCCG GTCGATCGAG GCGATGGGGC GCGCCGTCGG CGGGCAGGCT
GTCGTCCGCA TCCGAGAACT GAGCGGCGTG CGCCGCGAGC TCGCCGACAT GACCCGGCGC
TTCAAGGCGC TGCAGGAAGA AACCGAGATG CTGCGCGGCT TCGCCACCGC CGCGCCGTGG
CCGATCTGGA CCCGCCGCTC CGACGGCACA CTCAGCTTCG CCAACGCCGC CTATGCGCGG
GCGACCGATG CCAGCGACGC CGCGGACGCG ATCGGCCGCA ATCTCGAACT GCTCGATTCC
GGCGATCGCG CCGCGTTGGC ACGTGCGCTC GGCGACGGCT ACGAATATTC CGGCCGGCTG
CCGATCGTGG TCGGCGGCGA GCGCCGCTAC TACGACGTCC GCGCCCTGAA GGTGAGCGGC
GGCAGCGCCG GCATCGCAGT CGACGCCACG GAAACGGCCG CGCTCGGCGC CGCACTAGAG
CGGATGGCCG ATGCGCATCG GCGCACGCTT GATCAGCTTT CTTCCGGCGT TGCGGTGTTC
GACGCTCAGC GCCGGCTGTC GTTTTACAAC GACTCCTATC GCAAGCTGTG GGACCTCGAC
CGCATCTTCC TCGATAGCCA TCCCGACGAT TCCACCGTGC TCGACCGGCT GCGAGCCGAG
CGCAAGCTGC CGGAGGAGCG CGACTTCAAG GCGTGGAAGA ACAAGCTGCA CGAAGCCTAT
CGGGCGGTCG AGGCCGAGAA GGACGTCTGG TATCTGCCGG ACGGCCGCGC CGTCAGCATC
GTCACCACGC CCAATCCTGA AGGCGGCGTC ACCTATCTGT TTGACGACGT CACCGAGAGT
CTCGACCTCA AGCGTCGCTA TGGCGGCCTG ATCGATGTTC AGCGCGAAAC GCTCGACAAT
CTGTCGGAAG CCGTTGCGGT GTTCGGCTCC AATGGCTGCG CGCAGTTGTT CAACCCGCCG
TTCGCGCGGA TGTGGAACCT GTCGGCCGAG GCGCTGCAGA GCCAGCCGCA CATCGAGGCG
ATCGAGGAGT GGTGCCGGCC GTTGTTCGAC GACGACGTGT TCTGGCAGGC GCTACGCGGC
GCCATCACCG GCATCGACGA TCGCCGCCAC GTCCTGCTCA AGATCGAGCG CAAGGACGGC
AGCGTGCTGG CCTGCAAGAC CATGCCGCTG CCCGACGGCG CCACGATGCT GACGTTCCAG
GACATCACCG ACACCGAGAA CGTCGAGCGG GCGCTGCGCG AGCGCAATGA GGCGCTCGAG
ACCGCCGATC GCATCAAGAT CGATTTCGTC CACCATGTCT CGTATGAGCT GCGGTCGCCA
CTGACCACCA TCATCGGCTT CGCACACTTC CTCAGCGATT CTTCGACCGG GCCGCTCACC
GAGAAGCAGG CCGAGTACGT GAACTACATC ACGACCTCGA CCAACGCGCT GATGGCGATC
ATCAACAACA TCCTCGATCT GGCCAGCATC GACGCCGGGG CGATGACGCT CAATCTCGGC
CCGATCGACA TCCGCAAGGC GATCGATGCG GCGGCCGAGG GCATTCAGGA CCGGCTTGCG
CGCGATCAAA TCGCGCTGCA GATCGACGTC GATCCGGCGA TCGAGAGCTT TGTCGGCGAC
GAGCGGCGCG TCGTGCAGGT GCTGTACAAT CTGCTCGCCA ATGCGATCGA TTTCTCGCCC
TCGCAGGGGA CGGTGCGGCT GACGGTGCGC CGGGGCGAAA CCCGGGTGGC GTTCACTGTC
ACCGATTCTG GTCCCGGCAT CGCGCCGGCG TTCAAAGAGA AAATGTTCGA TCTGTTCGAG
AGCGATCCGC AGGGCTCGCG CCATCGTGGC GCCGGCCTTG GCCTGTCACT GGTGCGTTCG
TTCGTCGAGC TGCACGGCGG TAAAGTCCTG GTCGAGTCGG CGGTCGGTCG CGGCACATCG
GTGACCTGCG AGTTTCCGAT CGAGCCGGCC GCCCAACGCC ACGCGGCCGA ATGA
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| Protein sequence | MSGVLGSIRR TSLSCTSLVH GLAGTAVMVA SSPARAADDH LAAITSSLLL DLNRHEMMTL
IIALAALGFS VMSAIMLVRT RQRAVAREAG LRADLQGLQA ESDRFQALLF AEPQVLISWA
AGDSRPQVSG DTALFLPLET QSRQPQRVLA FGTWLPPEPA LQMDHAVDAL LDKGEGFLLQ
LVTSNGRSIE AMGRAVGGQA VVRIRELSGV RRELADMTRR FKALQEETEM LRGFATAAPW
PIWTRRSDGT LSFANAAYAR ATDASDAADA IGRNLELLDS GDRAALARAL GDGYEYSGRL
PIVVGGERRY YDVRALKVSG GSAGIAVDAT ETAALGAALE RMADAHRRTL DQLSSGVAVF
DAQRRLSFYN DSYRKLWDLD RIFLDSHPDD STVLDRLRAE RKLPEERDFK AWKNKLHEAY
RAVEAEKDVW YLPDGRAVSI VTTPNPEGGV TYLFDDVTES LDLKRRYGGL IDVQRETLDN
LSEAVAVFGS NGCAQLFNPP FARMWNLSAE ALQSQPHIEA IEEWCRPLFD DDVFWQALRG
AITGIDDRRH VLLKIERKDG SVLACKTMPL PDGATMLTFQ DITDTENVER ALRERNEALE
TADRIKIDFV HHVSYELRSP LTTIIGFAHF LSDSSTGPLT EKQAEYVNYI TTSTNALMAI
INNILDLASI DAGAMTLNLG PIDIRKAIDA AAEGIQDRLA RDQIALQIDV DPAIESFVGD
ERRVVQVLYN LLANAIDFSP SQGTVRLTVR RGETRVAFTV TDSGPGIAPA FKEKMFDLFE
SDPQGSRHRG AGLGLSLVRS FVELHGGKVL VESAVGRGTS VTCEFPIEPA AQRHAAE
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