Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0068 |
Symbol | |
ID | 6407711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 72268 |
End bp | 73248 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642709977 |
Product | signal peptide peptidase SppA, 36K type |
Protein accession | YP_001989106 |
Protein GI | 192288501 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0824847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTTG ATTCCGATGT GATCGTCGAT CGCCGACGGA TGCGAAGGAA GCTGACGTTC TGGCGCGTGG CGGCTGTACT GGTCGCGATC GTCGCTGTGG TGGCGATCGG TGCGATGGTG TCGCCGGCGG GACGCGGTGC GCTCACGTCG ACCGGCTCGA TCGCCCGCAT CAAGATCGAG GGCCTGATCC GCAGCAATGA CGAGCGTGTC CAAGCGCTCG ACCGGCTCGG CAAGTCGTCC TACTCGGCCG TGATCGTCCA CATCAATTCG CCCGGCGGCA CCACTGCGGG CTCCGAGGAA TTGCACGACG CGCTGGCGAG GCTGAAGGCG AAGAAGCCGA TGGTCGTGGT GGTCGAAGGG CTCGCCGCCT CCGGCGGCTA CATCGCCGCA CTTGCCTCCG AACACATCGT CGCGCAGCAG ACCTCACTGG TCGGCTCGAT CGGCGTGCTG TTCCAATATC CGAACGTGTC CGAGCTGCTG AAGACCGTCG GCGTCAAGGT CGAGGAAGTG AAATCGTCGC CGCTGAAGGC TGCGCCGAAC GGTTTCGAGC CGACCAGTCC CGAGGCGCGC GCCGCCATCG AGGCGCTGGT GAAGGATTCC TACGCTTGGT TCCGCGGCAT GGTTCAGCAG AGCCGCAAGA TGACCGACGA TCAGCTCAAC GTCGTCGCCG ACGGCCGGGT GTTCACCGGG CGCCAGGCCG TGGGCCTGAA ACTGATCGAC GAACTCGGCG ACGAGAGGAC CGCGATCGCG TGGCTGGAGA AGGCGAAGAA CGTCAAAGCC GGCCTGCCGG TACGCGACTA CAAGCTCGCA CCGCAGTTCG GCGATCTAAC GTTCCTGCGA GCTGCGGCTT CCGTTGCGTT CGACGCAGCG GGGCTTGGCG TGATCGCGCG CCGCGTCGAG CAGACCGGCG CGATGCAGTC GGTCGAACGG CTCGGCCTCG ACGGGATGCT GGCGCTGTGG GCACCGTCGG CGGGTCAGTG A
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Protein sequence | MSLDSDVIVD RRRMRRKLTF WRVAAVLVAI VAVVAIGAMV SPAGRGALTS TGSIARIKIE GLIRSNDERV QALDRLGKSS YSAVIVHINS PGGTTAGSEE LHDALARLKA KKPMVVVVEG LAASGGYIAA LASEHIVAQQ TSLVGSIGVL FQYPNVSELL KTVGVKVEEV KSSPLKAAPN GFEPTSPEAR AAIEALVKDS YAWFRGMVQQ SRKMTDDQLN VVADGRVFTG RQAVGLKLID ELGDERTAIA WLEKAKNVKA GLPVRDYKLA PQFGDLTFLR AAASVAFDAA GLGVIARRVE QTGAMQSVER LGLDGMLALW APSAGQ
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