Gene Rpal_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0065 
Symbol 
ID6407708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp68564 
End bp69238 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID642709974 
Productprotein of unknown function DUF374 
Protein accessionYP_001989103 
Protein GI192288498 
COG category[S] Function unknown 
COG ID[COG2121] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0779257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACGC CCGCTTTCGT CAAACGGATT ACGCGATCAG ATGCGGTCCT GTCGCTCGGC 
GTCAACTTTT CCAAGATCTA TTTTAAGTTC GTGATGTGGA CCGGCCGATA CGATCGGCAG 
GCCGTTCCGA TCCCCGAGCC TTACATCCTG GCGATGTGGC ACGGGCGGCT GATCATGGCG 
CCGATGCTGC AGACCAAGAG CAAGCCGCTG GTCGCGCTGA TCAGCGGACA TCGCGACGGC 
AAGATCATTT CCAGGGTCGG GGCCGCGTTC GGGATTCAGA CCGCGGTCGG CTCAAGCTCC 
AAGGGCGGGA TGCGGGCGGC GCGCGAAATG ATGCGGCTGG GCAAGTCCGG CCACAGCCTG 
TTCGTCACAC CCGACGGCCC GCGCGGTCCG CGGATGCGCA TCAACAGCGA GGGCGTTCTC 
GATCTGGCGC GGCTGACCGG GCTGCCGATC CTGCCGGTTT CGGTCAGCCT ATCGCGTCAC 
AAGCTGCTTC GGAGCTGGGA TCGGCTGATG CTGCCGGGAT TGTTCGCGAA GGTCGCGATC 
CGGTTCGGCG AGCCGATCAC CGTCGAGGCT GGCTCGCCGA CCGCAGAGAT GGCGGAGCGG 
CTGCAGGCGG CTCTGACCGC CGCGCAGAAC GAAACCGACC GGATCGTCGG CCTTCAGCCG 
GTCGAAGTGG CCTGA
 
Protein sequence
MATPAFVKRI TRSDAVLSLG VNFSKIYFKF VMWTGRYDRQ AVPIPEPYIL AMWHGRLIMA 
PMLQTKSKPL VALISGHRDG KIISRVGAAF GIQTAVGSSS KGGMRAAREM MRLGKSGHSL 
FVTPDGPRGP RMRINSEGVL DLARLTGLPI LPVSVSLSRH KLLRSWDRLM LPGLFAKVAI 
RFGEPITVEA GSPTAEMAER LQAALTAAQN ETDRIVGLQP VEVA