| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0061 |
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| Symbol | |
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| ID | 6407703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 64647 |
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| End bp | 65852 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642709969 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001989099 |
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| Protein GI | 192288494 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.603541 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCTG CATCGATGCC CGGCGCAATC GCCGGATTGC GCGTGATCGA TCTCACTCGC
GTGCTCGGCG GCCCCTATTG CACCCAAATC CTCGCCGACC ACGGCGCCAA CGTCATCAAG
GTCGAACCTC CGGCCGGCGA CGAAGTGCGC GACTGGGGCC CTCCCTTCCA TGACGAGGAC
GCGGCGTATT TTCTCGGCGT GAATCGCAAC AAGCGTTCCA TCGGTCTCGA TCTCGCCTCG
CCCGGCGGGC GCGAGGTGCT GTTGAAGATG CTCGAAGACG CCGACGTGCT GATCGAGAAT
TTCAAACCCG GCACGCTCGA CAAATGGGGC CTCTCCAACG AGGTGATTCG CGAGAAGTTT
CCGCGGCTGG TGCATTGCCG GATTTCGGGC TTCGGCGCCG ACGGCCCGCG CGGCGGCAAT
CCCGGTTATG ACGCCATCAT CCAGGCGATG ACCGGCATGA TCGCTGCGAC CGGCTCGCCG
GAGACCGGCC CGGTGCGAAT CGGTGTGCCC CTGGTCGACA TCACCACCGG CCTTTATGCG
ACCATCGGTA TTCTGATGGC GCTGGCGGAG CGTGAGCGCT CCGGCAAGGG CCAGTTCGTG
GAGACCACGC TGTACGAAAC CGGTCTCGCG ATCATGCATC CGCATACCGC GAACTACTTC
CTGCATGGCA AGCCGCCGGC GCTGACCGGT AACGAGCACC CGAATCTGGT GCCGTATTCC
ACCTTCAACG CCCGCGACGG CCAGATCTTC ACCGGCGTCG GCAATGACGG TACCTTCCGC
AAGCTGTGCA AGGAAATAGG TAAGCCGGAA CTTGGCACCG ATCCGCGCTT TGCGCGCAAC
AAGGACCGCA TCGCCAACCG CGCCGCCCTC CGCGCCGAAC TCGAAGCGGT GTTCAGCCAG
CACGACGCGG TTCCGCTGTG CGACCGGCTG CTCAATGCGG GCCTCCCGGC CGGCCCGGTG
CAGACGATCG ACAAGGCGCT GACCAGCCCC CACACCGCTT ACCGCGGCGA TGTGATCGAG
AAGGACTGGT ACAAGGGCGT AGCCTCGCCG ATCAGGTTCG AGCGCACCAA GGCGAGCCTG
CGCGGCCTGC CGCCGAAATT CAGCCAGCAC GCCAGCGAAG TGTTGGGCGA GTTCGGCTAT
TCGGCGGACG ATATCTCCAA GCTGGTCGCC GACGGCATCG TCAGCGGCCC AGAGCGCAAG
CGCTGA
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| Protein sequence | MTSASMPGAI AGLRVIDLTR VLGGPYCTQI LADHGANVIK VEPPAGDEVR DWGPPFHDED
AAYFLGVNRN KRSIGLDLAS PGGREVLLKM LEDADVLIEN FKPGTLDKWG LSNEVIREKF
PRLVHCRISG FGADGPRGGN PGYDAIIQAM TGMIAATGSP ETGPVRIGVP LVDITTGLYA
TIGILMALAE RERSGKGQFV ETTLYETGLA IMHPHTANYF LHGKPPALTG NEHPNLVPYS
TFNARDGQIF TGVGNDGTFR KLCKEIGKPE LGTDPRFARN KDRIANRAAL RAELEAVFSQ
HDAVPLCDRL LNAGLPAGPV QTIDKALTSP HTAYRGDVIE KDWYKGVASP IRFERTKASL
RGLPPKFSQH ASEVLGEFGY SADDISKLVA DGIVSGPERK R
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