| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0048 |
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| Symbol | |
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| ID | 6407690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 52844 |
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| End bp | 53584 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642709956 |
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| Product | protein of unknown function DUF1239 |
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| Protein accession | YP_001989086 |
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| Protein GI | 192288481 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5375] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGCGG TTCAGTTGTC GTCCTATCAG ACCGGAATGG AGGCGCGCTT CGCAGCAGCG
GCGCGCCACA GCCGTTTGGT GCGCACGCTG CGGCTCGCCG TGCCGCTGGT CGTAGTGCTG
TCGATGGCGG TGATCATCGC GATCTCGATC TTCAACCCGT TCCGCTATCT GTCGAAATTG
CCGATCGACG TCGGCGACCT CGTGGTCTCG GGCACCAAGA TCACGATGGA ATCCCCGCAT
CTGGCCGGCT TCACCAATGA CGGCCGCCCC TACGAGATGT GGGCCCGCAC CGCCACCCAG
GATCTGACCA GCCAGGATCA CGTCGATCTG CACACGCTGC GCGCCAAGGT GCAGTCGGAG
GACCAGTCCA CCGTCATCAT CGAGTCGCGG GAGGGCCAGT TCGAGACCAA GGCGCAGCTT
CTGAAGCTGA ACAAGGACGT CTACCTGCAC AATTCCACCG GCACCGAAGC GTGGATGACC
CAGGCCGACA TCGACATGGG CAAAGGCACC GTCACCTCCG ACTCGCCGGT CGACGTCAAA
TGGGACGGCG GCACGCTGCG CGGCCAGCGG ATGCGCATCA CCGAAAAGGG CGACCTGATC
CGGTTCGAGG GCGGTGTGGT GATGAACATC GACAACGCCT CGCTCGGAGA ACCGCCTCCC
GCCGCGCAGC CTGCGCCGCC GCCCGCCCCG ACCAAGCCGC GGGCAGCCCC CAATTCCGGC
CAGCGAGCCG TCGCGAGGTG A
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| Protein sequence | MTAVQLSSYQ TGMEARFAAA ARHSRLVRTL RLAVPLVVVL SMAVIIAISI FNPFRYLSKL
PIDVGDLVVS GTKITMESPH LAGFTNDGRP YEMWARTATQ DLTSQDHVDL HTLRAKVQSE
DQSTVIIESR EGQFETKAQL LKLNKDVYLH NSTGTEAWMT QADIDMGKGT VTSDSPVDVK
WDGGTLRGQR MRITEKGDLI RFEGGVVMNI DNASLGEPPP AAQPAPPPAP TKPRAAPNSG
QRAVAR
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