Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0042 |
Symbol | |
ID | 6407683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 46773 |
End bp | 47558 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642709949 |
Product | conserved hypothetical protein, putative alpha/beta hydrolase superfamily |
Protein accession | YP_001989080 |
Protein GI | 192288475 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAAAGT CACCAGAACC GGCCCCGGAT TTCGTCACCG TCGGCGACGG CGCCCCAGCA CGGCGGATCG CGGTCCGCGC CCGACCGGGC GCATCCCCCG GCCTGTTCTG GCTCGGCGGC TTCAACTCCG ACATGACCGG CACCAAGGCG ACCGCTCTCG ACCAATGGGC CGAGGCGCGC GGCCGGGCCT GCGTCCGGTT CGACTATTCC GGCCATGGCG AATCCTCCGG CAGCTTCGCC GACGGCACCA TTGGCCGCTG GCTGGAAGAG AGCCTCGCGG TGTTCGACGC CTACGCTCGC GGTCCACAAA TCGTGGTCGG CTCGTCGATG GGCGGCTGGA TGGCACTGCT GCTGGCCCGC GCCCTGCGCC GCCGCGGCGG CGACGCGGCC GCCAAGCTGG CCGGATTGGT GCTGATCGCG CCGGCGCCGG ATTTTACCGA AGCGCTGATG TGGAAGGGTT TCTCGCTCGA AATCCGCGCC GAGATCGAGA CCAAGGGCGT CTGGCACCGC CCCTCGGAGT ACGGCGAGCC CTACCCGATC ACCAAGGCGC TGATCGAAGA CGGCCGCAAT CACCTCGTGC TCGACGGTAT GATCGAGGTC GGCTGTCCGG TCCGCATTCT GCAAGGCAAA CAGGACGAAG ACGTGCCGTG GCGCCACGCC TTCGAGCTGG CTGAGCGGCT GCCGACCGAC GACGTGGTCC TGACGATGAT TCAGGACGGC GATCACCGGC TCAGCCGCCC GCAGGACATC GCCCGCATGC TGGCCGCGGT CGAGGAGCTG GGCTGA
|
Protein sequence | MTKSPEPAPD FVTVGDGAPA RRIAVRARPG ASPGLFWLGG FNSDMTGTKA TALDQWAEAR GRACVRFDYS GHGESSGSFA DGTIGRWLEE SLAVFDAYAR GPQIVVGSSM GGWMALLLAR ALRRRGGDAA AKLAGLVLIA PAPDFTEALM WKGFSLEIRA EIETKGVWHR PSEYGEPYPI TKALIEDGRN HLVLDGMIEV GCPVRILQGK QDEDVPWRHA FELAERLPTD DVVLTMIQDG DHRLSRPQDI ARMLAAVEEL G
|
| |