Gene Rpal_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0042 
Symbol 
ID6407683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp46773 
End bp47558 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID642709949 
Productconserved hypothetical protein, putative alpha/beta hydrolase superfamily 
Protein accessionYP_001989080 
Protein GI192288475 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGT CACCAGAACC GGCCCCGGAT TTCGTCACCG TCGGCGACGG CGCCCCAGCA 
CGGCGGATCG CGGTCCGCGC CCGACCGGGC GCATCCCCCG GCCTGTTCTG GCTCGGCGGC
TTCAACTCCG ACATGACCGG CACCAAGGCG ACCGCTCTCG ACCAATGGGC CGAGGCGCGC
GGCCGGGCCT GCGTCCGGTT CGACTATTCC GGCCATGGCG AATCCTCCGG CAGCTTCGCC
GACGGCACCA TTGGCCGCTG GCTGGAAGAG AGCCTCGCGG TGTTCGACGC CTACGCTCGC
GGTCCACAAA TCGTGGTCGG CTCGTCGATG GGCGGCTGGA TGGCACTGCT GCTGGCCCGC
GCCCTGCGCC GCCGCGGCGG CGACGCGGCC GCCAAGCTGG CCGGATTGGT GCTGATCGCG
CCGGCGCCGG ATTTTACCGA AGCGCTGATG TGGAAGGGTT TCTCGCTCGA AATCCGCGCC
GAGATCGAGA CCAAGGGCGT CTGGCACCGC CCCTCGGAGT ACGGCGAGCC CTACCCGATC
ACCAAGGCGC TGATCGAAGA CGGCCGCAAT CACCTCGTGC TCGACGGTAT GATCGAGGTC
GGCTGTCCGG TCCGCATTCT GCAAGGCAAA CAGGACGAAG ACGTGCCGTG GCGCCACGCC
TTCGAGCTGG CTGAGCGGCT GCCGACCGAC GACGTGGTCC TGACGATGAT TCAGGACGGC
GATCACCGGC TCAGCCGCCC GCAGGACATC GCCCGCATGC TGGCCGCGGT CGAGGAGCTG
GGCTGA
 
Protein sequence
MTKSPEPAPD FVTVGDGAPA RRIAVRARPG ASPGLFWLGG FNSDMTGTKA TALDQWAEAR 
GRACVRFDYS GHGESSGSFA DGTIGRWLEE SLAVFDAYAR GPQIVVGSSM GGWMALLLAR
ALRRRGGDAA AKLAGLVLIA PAPDFTEALM WKGFSLEIRA EIETKGVWHR PSEYGEPYPI
TKALIEDGRN HLVLDGMIEV GCPVRILQGK QDEDVPWRHA FELAERLPTD DVVLTMIQDG
DHRLSRPQDI ARMLAAVEEL G