Gene Rpal_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0037 
Symbol 
ID6407678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp43000 
End bp43479 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content66% 
IMG OID642709944 
Productprotein of unknown function DUF559 
Protein accessionYP_001989075 
Protein GI192288470 
COG category[S] Function unknown 
COG ID[COG2852] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGATC CGAAGCAACC GACCTGGAAC GTGTCGCCGA GCCAGCGCCG GCATGCGCGC 
GAGCTGCGAA AGAAGTCGAC CGAGGCCGAG CGGCTGATGT GGGGCGAGCT GCGCGACAAG
CGTCTCAATG GCGTCTCGTT CAAGCGACAG GTGCCGATCG GGCCGTACAT CGCCGACTTC
GCCTGCCACG CGAAAAAGCT GGTGGTCGAG CTCGATGGCG GTCAGCATTT TCCCGATGAC
GGTGAACGCT CCGATGCGGC GCGCACGGCC GCGATCGAGG CCCGCGGGTT TCGGGTGATC
CGCTTCAGCA ATCATGAAGT CATGACTAAT CGAGCAGGGG TGTTGCAGAG CATTGCGGAT
GTGCTTGCGG CAAGGGCCCT CCCCCCAACC CTCTCCCGCA AGCGGGAGAG GGTGCGCGCC
AAGCGCGCGG CGAAGCCTCG CTCTGACGCG GGTGCCGCGA ACGACCAGGG CGATGAGTAG
 
Protein sequence
MDDPKQPTWN VSPSQRRHAR ELRKKSTEAE RLMWGELRDK RLNGVSFKRQ VPIGPYIADF 
ACHAKKLVVE LDGGQHFPDD GERSDAARTA AIEARGFRVI RFSNHEVMTN RAGVLQSIAD
VLAARALPPT LSRKRERVRA KRAAKPRSDA GAANDQGDE