Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0034 |
Symbol | |
ID | 6407675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 37748 |
End bp | 38632 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642709941 |
Product | hypothetical protein |
Protein accession | YP_001989072 |
Protein GI | 192288467 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.920706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGTGTGG TGCTCGAGAC TATCGGCAAG TTGATCGCCA GCTACTTGCA GAAGGAAGAG CCGGGCTACG AGCCGTTCAC CCCGAGCGAT CCGGACCATC TCCGTACCAT CATGGAGCCC GGCGACGTCC TGCTGGTCGA GGGCAACAGC CGGATCGCCG GCATCATCAA GTATCTGACG CAATCGACCT GGTCGCACGC CGCGCTGTAT GTCGGCCCGA TCGACGGTGT CACCGAGCCG GACGGCGAGC CGCACGTGCT GGTCGAGGCC AATATCGGCG AGGGGGTGAG TTCGTCGCCG CTGTCGCGGC ACCTTGCCTA CCACACGCGG GTGTGTCGCC CGGTCGGCCT TTCTTATGAA GACCGCCACA CGGTGTGCCG CTATGCGATC AATCGCATCG GCTTTGGCTA CGACACCAAG AACATCATCG ATCTGATGCG CTATCTGGTG CCGCTGCCGG TGCCGCAGCG CTGGCGCCGA CGGATGATCG CGCTCGGCTC GGGCGATCCG ACCAAGATCA TCTGTTCGGC GCTGATCGCG CAGGCGTTCG AGGCGGTGCG CTATCCGATC CTGCCGAAGA TCACCAAGGC CGGCAGCCGC GCGGCGCGGC GCGAGATCCT GCACATCCGG CATTCGACGC TGTACATGCC GCGAGACTTC GACATCTCGC CGTATTTCGA GGTGGTGAAG CCGACCATCG TCAACGGCTT CGACTACACG GCGCTGCATT GGGCCGACAA ACCGAAGCCG GTTGTCGAGA GTGACAGCCC GTTCGCGTCG CCGATCGAGG GGTCCGAAAG TGCGCCGTCG CTGGCAACGC AGACAGCCGA AGCCGATCCG GCTCTCGATC TTGCCGGGCC GCCCAAGCTC GGCGCAGTCG CCTAA
|
Protein sequence | MGVVLETIGK LIASYLQKEE PGYEPFTPSD PDHLRTIMEP GDVLLVEGNS RIAGIIKYLT QSTWSHAALY VGPIDGVTEP DGEPHVLVEA NIGEGVSSSP LSRHLAYHTR VCRPVGLSYE DRHTVCRYAI NRIGFGYDTK NIIDLMRYLV PLPVPQRWRR RMIALGSGDP TKIICSALIA QAFEAVRYPI LPKITKAGSR AARREILHIR HSTLYMPRDF DISPYFEVVK PTIVNGFDYT ALHWADKPKP VVESDSPFAS PIEGSESAPS LATQTAEADP ALDLAGPPKL GAVA
|
| |