| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0017 |
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| Symbol | |
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| ID | 6407658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 18559 |
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| End bp | 19440 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642709924 |
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| Product | cytochrome c oxidase, cbb3-type, subunit III |
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| Protein accession | YP_001989055 |
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| Protein GI | 192288450 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGACC ATGCACATCA CGGCGAAATC GACAAAGTCA CCGGCACGGC CACGACCGGC
CACGAGTGGG ACGGCATTCA GGAACTGAAC ACGCCGCTGC CGCGGTGGTG GATCTGGACC
TTCTACGCCA CCATCATCTG GTCGATCGGC TACTTCATCG TCTATCCGGC GTGGCCGCTG
ATGAACGGCT ACACCCACGG CCTGTTCGGT TACTCCTCGC GCGCCGAACT CGACGTCGAT
CTCGCCAAGC TCAACCAGGT TCGCGGCGAG AAGATGCAGG CGCTGGCGAC CGCCTCGCTC
GAGGAGATCG AGAAGAACCC GGCGCTACTC GCTCTGGCTC GCGCCAAGGG CAAGGTGGTG
TTCGGCGACA ACTGTGCCCC GTGCCACGGC TCGGGCGCTG CCGGCGGCAA GGGCTTCCCG
AACCTCAACG ACGACGACTG GCTGTGGGGC GGCTCCCTCG AGCAGATCGA AAAGACCATC
AAGTACGGTG CGCGCTCCGG TAACGACGAA GGCCACATGG GCAACATGCT GGCATTCGGC
AAGGACGGCA CTCTGACCAA GGATCAGATC GTTCAGGTCG CTAACTTCGT TCGTTCGCTG
TCGGGCCAGT CGACCCGGCC GGGCGTCGAT CTGGCGGCCG GCAAGCAGAT CTTCGCGGAG
AACTGCGTTG CCTGTCACGG TGAAGACGCC AAGGGCAATC CCGAACTTGG TGCGCCCAAC
CTGACGGATA AGATCTGGCT GTACGGTGGT GACGAAGCCA CCATCATCGA GACGATCACC
AACGGCCGCG GCGGCGTGAT GCCGGCGTGG ATCGGTCGCC TCGATCCCAC CACCATCAAG
GCGATGGCGG TGTACGTCCA CTCGCTCGGC GGCGGCAAAT AG
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| Protein sequence | MADHAHHGEI DKVTGTATTG HEWDGIQELN TPLPRWWIWT FYATIIWSIG YFIVYPAWPL
MNGYTHGLFG YSSRAELDVD LAKLNQVRGE KMQALATASL EEIEKNPALL ALARAKGKVV
FGDNCAPCHG SGAAGGKGFP NLNDDDWLWG GSLEQIEKTI KYGARSGNDE GHMGNMLAFG
KDGTLTKDQI VQVANFVRSL SGQSTRPGVD LAAGKQIFAE NCVACHGEDA KGNPELGAPN
LTDKIWLYGG DEATIIETIT NGRGGVMPAW IGRLDPTTIK AMAVYVHSLG GGK
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