| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0002 |
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| Symbol | |
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| ID | 6407643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1872 |
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| End bp | 2990 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642709909 |
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| Product | DNA polymerase III subunit beta |
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| Protein accession | YP_001989040 |
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| Protein GI | 192288435 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTCA CGGTCGAACG CGCGCAACTG TTGAAGTCGC TGAGCCACGT GCATCGCGTG
GTCGAGCGCC GCAACACCAT CCCGATCCTC GGCAACGTGC TGGTGCGAGC CGAGAACGCG
CAGCTCGCGC TGAAGGCGAC CGACCTCGAC CTCGAGGTCA CCGAGACGTT GCCGGCCGAA
ACCGCGACCG CGGGTTCAAC AACCGTCCCG GCGCACATGT TCTACGACAT CGTCCGAAAG
CTGCCGGACG GCTCGCAGAT CGTGCTCGAA AGTGACGGCG ATCGTTCGGT GCTGGCGATC
CGCGCCGGCC GCTCGCGGTT CACGCTGCAG ACGCTGCCGG AGAGCGACTT CCCGGATCTC
GCCGCCGGCG AGATGAGCCA CGCCTTCCGC CTGCCGGCCT CCGACGTCAA GCGGCTGATC
GATCGCACCC AGTTCGCGAT CTCGACCGAA GAGACCCGCT ACTATCTCAA CGGTATCTAT
CTGCACACCG CCGGTAGCCC CAAGGCATCT AGCTTGCGCG CGGTCGCGAC CGACGGCCAC
CGGCTGGCGC AGCTCGACCT GACGCTGCCG AGCGGCGCCG ACGGCATGCC GGGCTTGATC
GTGCCGCGCA AGACCGTGGG CGAAGTGCAG CGGCTGATCG AAGACACCGA AGCCGAGATC
GGCATCGAAC TGTCGACCGG CAAGATCCGC TTCACGCTCG GCAACGTCGT ACTGACCTCC
AAGTTGATCG ACGGCACCTT CCCGGACTAC GGCCGGGTGA TCCCGCAGAA CAACGACAAG
GAACTGCGGG TCGACAAGAA GGACTTCGAA GCCGCGGTCG ACCGCGTTTC GACGATCTCT
TCCGAACGCG GCCGCGCCGT GAAACTGGCG CTGTCAGCAG GCAAGCTGGT TCTGTCGGTG
ACCAATCCAG ATTCCGGCAG CGCGACCGAA GAACTCGAAG TCGAGTACGC GTCCGACCCG
CTCGATATCG GCTTCAACTC ACGTTACCTG CTCGACATCG CTGCGCAGAT CGAAGGCGAA
GTCGCCGTGC TCAAGCTCGC CGACCCCGGC TCGCCGACCT TGATTCAGGA CCGCGACTCC
AAGAGCGCGC TGTACGTCCT GATGCCGATG CGGGTGTAG
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| Protein sequence | MKVTVERAQL LKSLSHVHRV VERRNTIPIL GNVLVRAENA QLALKATDLD LEVTETLPAE
TATAGSTTVP AHMFYDIVRK LPDGSQIVLE SDGDRSVLAI RAGRSRFTLQ TLPESDFPDL
AAGEMSHAFR LPASDVKRLI DRTQFAISTE ETRYYLNGIY LHTAGSPKAS SLRAVATDGH
RLAQLDLTLP SGADGMPGLI VPRKTVGEVQ RLIEDTEAEI GIELSTGKIR FTLGNVVLTS
KLIDGTFPDY GRVIPQNNDK ELRVDKKDFE AAVDRVSTIS SERGRAVKLA LSAGKLVLSV
TNPDSGSATE ELEVEYASDP LDIGFNSRYL LDIAAQIEGE VAVLKLADPG SPTLIQDRDS
KSALYVLMPM RV
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