Gene Cphamn1_2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2559 
Symbol 
ID6376257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2731731 
End bp2732654 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content54% 
IMG OID642685037 
ProductROK family protein 
Protein accessionYP_001960934 
Protein GI189501464 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAGC ACTACTGGGG AATCGATCTG GGAGGGACAA AAATTGAAGG CTGTGTGCTT 
GATGAAAACA TGCGCTCTCT CGTTCGCCTG AGGATTCCCA CCGAGGCAAG GGAAGGCTAT
GGTCATATTC TCTCCAGAGT AGACAATCTG TTACGAATGA TGGCCGATGA ACTTCGCTGT
GAACTTCCCT CTCACATAGG GATAGGAACT CCCGGAAGGC TTGACAGACG AAGCTCCCTT
CTCAGGAATT CAAACACAGG CTGTCTGAAC GGGAGGCCTC TGCTTTGTGA TCTTGAAGAG
ACTCTGCAGA TAAAGGTACG TCTTGACAAT GACGCGAACT GTTTCGCTCT CGCTGAATCG
CTGCTCGGGA CGGGACGCAC GGTCATGCAG CGAGAGGATG CTGTCGCTTT CGGCGTAATT
CTCGGTACCG GCGTAGGGGG AGGTATTGTC TGCAACGGTC GCGTTCATGT GGGAGCGCAT
GGAATTGCCG GAGAATGGGG CCACAACCGG CTTTTCGAAA ACGGAGAAGC CTGTTATTGC
GGGAGAAAGG GTTGCGTGGA AACGGTGCTT TCCGGTCCTG CCCTTGAACG ATACTATGCC
AGGCGGTCGG GAGGAGTGAG GAAATCCCTT CAGGAGATCG CTCAATCAGA AGAGAGCGAC
CCTCTTGCAG GAGAAACAAT CTGGAGGCTG CTGAGCGGTT TCGGCAGGGG GATTGCCGGT
GTGATCAATA TTCTTGATCC GGATATACTT ATCATAGGCG GAGGAGTCGG TAATGTGGAG
GCGCTGTACT CTCCTGCGGC CCGCAAAGAA ATCGAAAAAC ATCTGTTCAA CGAATCCCTC
GATATTACGG TCGTGCGACC GGAACTGGGG GACAGCGCCG GTGTATTCGG CGCGGCACTA
TTAACAGCAC GGAAGCAAAG GTGA
 
Protein sequence
MRKHYWGIDL GGTKIEGCVL DENMRSLVRL RIPTEAREGY GHILSRVDNL LRMMADELRC 
ELPSHIGIGT PGRLDRRSSL LRNSNTGCLN GRPLLCDLEE TLQIKVRLDN DANCFALAES
LLGTGRTVMQ REDAVAFGVI LGTGVGGGIV CNGRVHVGAH GIAGEWGHNR LFENGEACYC
GRKGCVETVL SGPALERYYA RRSGGVRKSL QEIAQSEESD PLAGETIWRL LSGFGRGIAG
VINILDPDIL IIGGGVGNVE ALYSPAARKE IEKHLFNESL DITVVRPELG DSAGVFGAAL
LTARKQR