| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2542 |
|---|
| Symbol | |
|---|
| ID | 6376240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2714263 |
|---|
| End bp | 2714991 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642685020 |
|---|
| Product | protein of unknown function DUF45 |
|---|
| Protein accession | YP_001960917 |
|---|
| Protein GI | 189501447 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1451] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.65103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGTG CGTCAGTTAG TGACAACATG CATTCTCTTG TCTATGGGCG CAAGACCATC
GAGTACTGTC TGTTGTATCG TGAAAGAAAA ACCATGGAAA TCGCTGTTCA TCCTGATAGT
ACTGTTATGG TGAAGGCTCC GATTAACTCC AGTATTCCCT TGATCGAAAA CAAGTTAAGG
AAAAAGTCAC GCTGGATTCT CCGGCAGATG AACTACTTCA AACAGTTTGA TCCCAGAACG
CCCCCTCGCT GTTACGTGAA TGGCGAGACA CATCTCTATC TTGGGAAGCA ATACCGGTTG
AAAATGATTC AGGGTACGGA AAACTCGGTT AAGCTTTTCC GGGGATGCTT TTATGTTACT
ACAGATGATG CACCGAATCC GGAAACAGCC CGAAACATGC TGGACAAGTG GTATCTGGAG
AAAGCGCGAT TGCATTTCAG GGAAAGCATG GATCGTTGCT GGAAAAAATT CAGGGAGCTC
GATGTCGAAA AACCCGATTT GTCGATCAGG CGAATGCGAA AAAGATGGGG AAGTCTTTCA
GATAAGGGAA CGGTAACCCT CAATACGTAT CTGATCAGAG CACCTAAGGA ATGCATCGAC
TATGTTGTGA CTCACGAGCT TTGCCATCTG ATATTCCCTG ACCACAGCCC AGAATATTAT
AAGCTGCTTG ATTCAGTCAT CCCCGGCTGG GAGAAGATAA AACACAAACT TGAACTCAGT
ATGGTGTGA
|
|---|
| Protein sequence | MIGASVSDNM HSLVYGRKTI EYCLLYRERK TMEIAVHPDS TVMVKAPINS SIPLIENKLR
KKSRWILRQM NYFKQFDPRT PPRCYVNGET HLYLGKQYRL KMIQGTENSV KLFRGCFYVT
TDDAPNPETA RNMLDKWYLE KARLHFRESM DRCWKKFREL DVEKPDLSIR RMRKRWGSLS
DKGTVTLNTY LIRAPKECID YVVTHELCHL IFPDHSPEYY KLLDSVIPGW EKIKHKLELS
MV
|
|---|
| |