| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2539 |
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| Symbol | |
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| ID | 6376237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2708661 |
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| End bp | 2711918 |
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| Gene Length | 3258 bp |
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| Protein Length | 1085 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642685017 |
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| Product | SMC domain protein |
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| Protein accession | YP_001960914 |
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| Protein GI | 189501444 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT TAGAGCTTCG ATTGAAAAAC CTCAACTCCC TTTACGGGGA ATGGATTATA
GACTTTACGG AACCGGAATA TCTGTCCAGT GGTATTTTTG CCCTGACCGG ACCGACCGGT
GCCGGCAAGT CGACTGTTCT CGATGCAATC TGCCTCGCCC TCTACGGTTC AACGCCCCGT
CTCGGAAAGA TCACCAGAAG CGGAAACGAG ATCATGTCCC GCAAGACCGG CGAATGCTAC
GCCGAGGTAT TGTTTGAGTC CCAGGCCGGC CGTTTCCGTT GCCATTGGGA ACAGCGCCGT
GCCCGAAAGA GGGCTGAAGG AAAACTGCAG GATCAGGAAC ATTGGATAGC GGATGCCGAC
ACGGGTAAAT CTGTCGAAAC GAAAAAAAGT CTGGTGTCAG TGGTTATCGA AGAAAAAACA
GGGATGGACT TCGACCGCTT TACACGGTCC ATCCTGCTGG CGCAAGGGGG CTTCGATACC
TTTCTGAAGT CAGATGCCGA GCAGAAGTCG AAGATTCTGG AGCAGATCAC CGGCACAGAG
ATGTATTCGG CCATTTCGAG AAGGGTTCAT GAGCGCCAGC GTGACGAACG GGAACAGCTG
GACCTGCTTC AGGCTGAAAC ATCCGGCATT GTGATTCTGG AGCCGGAACA GGAAAAGGAA
ATTCAGGATG ATCTTACGGC CCGGCAGAAA CAGGAGACGG AGCTTGCCGG TAAATCAACC
GATACCGGCA AGGCCATTAC ATGGCTGACC ACTATTGAGG ACCTGAACAA GGAGATCCTC
AGTCTTACAG ATGAAGCCGC CAGGCTGAAG GGCGATACCG AGGCGTTCAA ACCGGAACGG
GCCAAACTTG AACAGGCCAC CAGGGCAGCA TCACTGGACG GAACCTATGC AACGCTCACA
TCCCACCGTA AACAGCAGGC TGACGATCAG GCGTCCTTGA AAACGGATGA AGCCGCATTT
CCTGAACTTG AAACATCTGC AAACACACAA GCTGAGACGC TCAAGACTGC CGAACAGCTC
ACCCTGAAAG CCAGAGAGGA GCTGAAAACG GCAGCCCCGT TGATCCGGAA AATCCGGTCG
CTTGATCAAA AAATTGCCGA ACAGACAAAG GCTGTATCAG AAGGCACTGA TACCTGTACC
AGGGAAGCCG CAAAGATTGA GACCGACAAG CAGGCAGGGG TGAAGGAACA GGAAAAACGA
ACCGCTGCAC AGAAAACACT GGAAGCTGCA GTGCTGTACC TCAAAGAGAA TGCGCGGGAT
GAATGGTTGA TCAGCGGGTT GGCTGGTATT GAAGAACAGT TCGGCAACCT GCTCGCCAAA
CAACAGGAGA TCACGCAGAA CGAAACTGAT CTCAAAAAAG CCGATACGGC CGTAGCAGAT
GCCGCAAAGA AGCTGGAGGA TGCTTCCAGA CAGTGTTCCC TCCAAAAACA GGAGATGGAG
TCAGCTACTA AAAATCTTCA GCAAGGCAAG GATGCCCTGA GCGAACTGCT GGGAGACAGA
CTGCTCCGGG AATATCGCAC CGAGAAGGAA ACCCTGCTGC GTGAAATGGC TTTTATCAGG
AAAATCGAGG AGCTTGAAGA CCACCGGGCC AAGCTGGAAG ACGGCAAACC CTGTCCACTC
TGTGGCTCGA CAGAGCATCC CTTTGCAGAG GGCAATGTTC CGGTTCCTGA TGTATTTGAG
CAGAAGATAG AGTCGCTGAC CAGGCTGATC AACAAGGCAG AGGATCAGGA AGCCGCCATC
AGAACACTTG AACAGGCGGA AACCACTGCC CGTAAAAACC TGAATGACAG CGAGAAGCTG
GAAACCAATG CCATTACTGA CAGGAAGGCT GCTGAAAAAA CGCTCGCTGA ATTGAAGGGT
GTCCTCACGA AACTTCGGAC CGGCTTTGAT GAACTCAAGC TGGCGGTTTC CGGGAAACTT
GAGCCACTTG GCATCAAAGA AATACCGGAG TCAGAGGTCG AGGCACTGCT CGAATCCCTC
AAATCAAGAC TGAAGGAATG GCAGGAACAG GTACAACAAA AGACCGAAAT CGAAAAACAG
ATTGCCGCCA TCGACAGCGA GGTGCAGCGT CTGGATGCCG TGATTGATAC GCAGGTCAAG
GCTTTGACTG AAAAACAGGA AAATCTGGAA CGGCTGAAAA AGGAGCTGGC CGACGGGACA
GATGAGAGAA AGCAATTGTA TGGCGATAAA AAGCCTGATG ATGAAGAAGG TCGACTGAAC
AAAGCGATTG CTGATGCCGA GGAGGTAGAG AAGAAAGCCA GAATCCTGAA CACTGAGTCG
CAGCAGAAAC TGACAACGGC GAAGACTCAT GTTGACTCCC TGAAGAAGCG CATAGAGCAG
AGAGCTACTG AACTGAATAA AGCGGAAACC GACTTTTCGG TGGCGCTGAT TCCAGCAGGC
TTTGCAGATG AGAAGTCCTT TCTCGAAGCC AGACTATCAC AGGAAGCTCG GGAGTCCTTA
TCCTCACGGG CCAAGGAGCT CGATGACGCG GGAACGGAGC TCAAAGCTAA ACAGAAAGAC
AGGGAGACGC GCCTGGCTAA AGAGGTCGCC AAAAAACTCA CGGACAAGAC ACTTGAGGAA
TTGGAACCGC AGTTCAAAGA ATTTGAAGAA TCCCTGAAAG AGCTGCGCGA TGCCATTTCC
TGCCTCAAGC ACAAGCTGAG TGAAAATTTC GTCGCCAAAG AACGGGCAGA GGAAAAACAG
GTGACCATAG AAGCCCGGAA AAGGGAGTGC CGTCGTTGGG ATAAACTGCA TGGTTTGATT
GGTTCGGCAG ACGGTAAAAA ATACCGCAAC TTTGCTCAGG GACTGACATT CGAGTTGATG
GTAGGACACG CCAACCGTCA GTTGCAAAAG ATGAATGACC GTTACTTGCT GCTTCGTGAT
GATGCGCAGC CTCTGGAGCT GAACGTCATC GATACTTATC AGGCCGGCGA AATCAGGTCT
ACCAGAAATC TGTCCGGTGG TGAAAGCTTC ATTGTCAGCC TTTCGCTGGC ACTGGGGCTT
AGCAAGATGG CCAGCCGGAA CGTTCGTGTG GATTCACTGT TTCTTGACGA AGGGTTCGGC
ACCCTGGATG AAGAATCGCT GGAAACCGCG CTGGAAACCC TGGCCGGGCT CCAGCAGGAC
GGCAAACTGA TAGGAGTCAT TTCCCACGTA TACGCGCTGA AGGAAAGGAT CGGCACACAG
ATAACCATAA CACCTGTTTC CGGCGGACGA AGTTCACTTG CAGGGCCGGG ATGCAGGAAG
GTTGTCACGA TCAAGTGA
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| Protein sequence | MKILELRLKN LNSLYGEWII DFTEPEYLSS GIFALTGPTG AGKSTVLDAI CLALYGSTPR
LGKITRSGNE IMSRKTGECY AEVLFESQAG RFRCHWEQRR ARKRAEGKLQ DQEHWIADAD
TGKSVETKKS LVSVVIEEKT GMDFDRFTRS ILLAQGGFDT FLKSDAEQKS KILEQITGTE
MYSAISRRVH ERQRDEREQL DLLQAETSGI VILEPEQEKE IQDDLTARQK QETELAGKST
DTGKAITWLT TIEDLNKEIL SLTDEAARLK GDTEAFKPER AKLEQATRAA SLDGTYATLT
SHRKQQADDQ ASLKTDEAAF PELETSANTQ AETLKTAEQL TLKAREELKT AAPLIRKIRS
LDQKIAEQTK AVSEGTDTCT REAAKIETDK QAGVKEQEKR TAAQKTLEAA VLYLKENARD
EWLISGLAGI EEQFGNLLAK QQEITQNETD LKKADTAVAD AAKKLEDASR QCSLQKQEME
SATKNLQQGK DALSELLGDR LLREYRTEKE TLLREMAFIR KIEELEDHRA KLEDGKPCPL
CGSTEHPFAE GNVPVPDVFE QKIESLTRLI NKAEDQEAAI RTLEQAETTA RKNLNDSEKL
ETNAITDRKA AEKTLAELKG VLTKLRTGFD ELKLAVSGKL EPLGIKEIPE SEVEALLESL
KSRLKEWQEQ VQQKTEIEKQ IAAIDSEVQR LDAVIDTQVK ALTEKQENLE RLKKELADGT
DERKQLYGDK KPDDEEGRLN KAIADAEEVE KKARILNTES QQKLTTAKTH VDSLKKRIEQ
RATELNKAET DFSVALIPAG FADEKSFLEA RLSQEARESL SSRAKELDDA GTELKAKQKD
RETRLAKEVA KKLTDKTLEE LEPQFKEFEE SLKELRDAIS CLKHKLSENF VAKERAEEKQ
VTIEARKREC RRWDKLHGLI GSADGKKYRN FAQGLTFELM VGHANRQLQK MNDRYLLLRD
DAQPLELNVI DTYQAGEIRS TRNLSGGESF IVSLSLALGL SKMASRNVRV DSLFLDEGFG
TLDEESLETA LETLAGLQQD GKLIGVISHV YALKERIGTQ ITITPVSGGR SSLAGPGCRK
VVTIK
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