| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2527 |
|---|
| Symbol | |
|---|
| ID | 6376225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2697679 |
|---|
| End bp | 2699181 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642685005 |
|---|
| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| Protein accession | YP_001960902 |
|---|
| Protein GI | 189501432 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTACCGT TGAAGAGGTT GTTGGAACGA CTTGATGTCT CTGCCGTTGT AGGCGGCATT
CAGTCTGAAA TGCGGATCGG AAACATTACA TCCGACTCAC GAAAAGCTTC GAAAGATACG
TTATTTGTTG CGGTGCGGGG TTTCGTGACC GATGGGCACG AATTTATCGG TGACGCTGTC
TCCCTTGGGT CGAAGGCGGT GGTCTGCGAA GAGCTTCCGG AAACCCCTGC TGAAAGGGTT
CTGTTTATTC TCGTGCCGGA TGCAAGGAGG GCGATGGCGC AGATCGCAAA GGCTTTCTAC
GGGGATATTT CGGACAGGCT CAGCATTATC GGGGTTACCG GAACGAACGG GAAAACCACG
ACGGCGCGCC TGATGGCCGG GATGATGAAC GACTGCGGGA TAAGAACGGG ATATATCGGT
ACAGGGCTTG CATTGGCAGG GGATGAGAAG ATCCTCCTCG AGAGGACGAC TCCCGAAGCG
GAAGAACTGC ATCGTCTTTT TTCAATCATG GCTGAAAGGG GTTGCAGGGC GGTGGTGATG
GAGGTTTCTT CTCATGCGCT TGTATTGCAG CGAACATTCG GAATTGTTTT TTCTGGGGCG
GTGTATACGA ACCTTACGCA GGATCATCTT GATTTTCATC ATACGATGGA ATCGTATGCC
TCGGCCAAGC GACTGTTGTT CGGCGCTGTT TCGCCTGAGG GATTTGTCGT TGTCAACGCA
GATGATCCCA GGGCCGGGTT TATGGCGGAA AACAGGGGAA AATCCAGGCT CTATTGCTGT
ACGGTCGGCG ACAGTCATTA TGCCTGCAGT GAGGGAAAAG CGTTCAGTGC GACGCTTCTT
GAGGCCGGGT TGCAGGCTGC CCGGGTTGCA ATAGATGCGG ATGGCAGGGG TTATGACGTG
CTTTTCAGGC TTACGGGGCT GTTCAATGTG ATGAATCTGC TGGAGGTGTT CGCGTCGGGT
GTCGCCCTGG GGCTTGAACC TGAAGCGGTT CTCCGCAGCC TGTCGACATC GTCACCTGTG
GAAGGACGGA TGGAGATTGT CAGGGATGCT GCCGGTGATT TCTTTGCTGT CGTGGACTAT
GCTCATACGC CTGATGCTCT TGAAAAAGTG ATCGGAACGC TCAACGAGCT CAAGCCGGAA
GAGGGTGAGC TGATCGTGGT GTTCGGATGC GGGGGGAACC GTGACCATGA GAAACGATCT
GTCATGGGGC GCATCGCCTC CAGAGGGGCG GACAGGCTTA TCATCACTTC GGATAATCCG
AGAGATGAAA ATCCGGAAAG CATTCTGGAC GATATCGCTG AAGGGATTGT TTCCCCGGGC
TATATGCGAT TTTGTGACCG GGCCGAAGCG ATACATTGCG GTGTTAACCT GCTGAAAGAA
GGGGATATAC TGCTTGTCGC AGGAAAAGGC CATGAAACCT GTCAGGAGAA AGCAGGCGCC
AGCAGCTTTT TTTCCGATCG GGAAACGACA GAAGAAGTTA TACTTGCGAG AAGTACTCAT
TGA
|
|---|
| Protein sequence | MVPLKRLLER LDVSAVVGGI QSEMRIGNIT SDSRKASKDT LFVAVRGFVT DGHEFIGDAV
SLGSKAVVCE ELPETPAERV LFILVPDARR AMAQIAKAFY GDISDRLSII GVTGTNGKTT
TARLMAGMMN DCGIRTGYIG TGLALAGDEK ILLERTTPEA EELHRLFSIM AERGCRAVVM
EVSSHALVLQ RTFGIVFSGA VYTNLTQDHL DFHHTMESYA SAKRLLFGAV SPEGFVVVNA
DDPRAGFMAE NRGKSRLYCC TVGDSHYACS EGKAFSATLL EAGLQAARVA IDADGRGYDV
LFRLTGLFNV MNLLEVFASG VALGLEPEAV LRSLSTSSPV EGRMEIVRDA AGDFFAVVDY
AHTPDALEKV IGTLNELKPE EGELIVVFGC GGNRDHEKRS VMGRIASRGA DRLIITSDNP
RDENPESILD DIAEGIVSPG YMRFCDRAEA IHCGVNLLKE GDILLVAGKG HETCQEKAGA
SSFFSDRETT EEVILARSTH
|
|---|
| |