Gene Cphamn1_2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2515 
Symbol 
ID6376213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2684480 
End bp2684968 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content51% 
IMG OID642684993 
Productsuccinate dehydrogenase, membrane subunit, putative 
Protein accessionYP_001960890 
Protein GI189501420 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAC ACTATGAAAA CGAGGGGTCG GCAGCTTCCC GTTCAAAGGC TTTTGTCTGG 
CTTATGCAGC GGGTGACCGG AGTCGGCCTT GTGCTGTTTC TCGTGCTTCA TTTCTGGGTT
CAGCATATGC CGACAGGGTT TCTTGCTACT GCCGGGGAGT ATAGTGAAAT ACTCAAGACC
CTTTCGGAAG CAAGTCCGGA AGTTGTTGAT GCAATTGCCG ATGGGAAGAT CAAGGAAGCG
CTTCCCGGCG AGCATGTGAT AACCTACAGC AAGGTGCTTG AACGGCTGCG TACTCCGCTG
TGGAGAATTA TCGATATTCT GCTCCTTCTG TTTGCCCTTC TGCACGGTAT GCTGGGGCTG
ATGAATGTTC TCGGGGATTA TATGAAGCGG GTTCGACTGC GAAAGGCTGT CGTGTTCTGT
TGCTGGGCGG TGACGCTTTT TCTTGCGGGC CAGGGCATTG TTGTTATTAT GGCTGTTGGA
ATGAAATAG
 
Protein sequence
MSQHYENEGS AASRSKAFVW LMQRVTGVGL VLFLVLHFWV QHMPTGFLAT AGEYSEILKT 
LSEASPEVVD AIADGKIKEA LPGEHVITYS KVLERLRTPL WRIIDILLLL FALLHGMLGL
MNVLGDYMKR VRLRKAVVFC CWAVTLFLAG QGIVVIMAVG MK