Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2514 |
Symbol | |
ID | 6376212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2682709 |
End bp | 2684466 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642684992 |
Product | succinate dehydrogenase, flavoprotein subunit |
Protein accession | YP_001960889 |
Protein GI | 189501419 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.136164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTTG TCTATCATGA TGTGATCATT GTCGGTGCGG GTCTCGCAGG TCTCAGGGCG GCGGTCGAAC TTTCCGGAAA ACACGACGTT GCGGTACTTT CAAAACTTCA TCCGCTCCGG TCGCATTCGG GGGCGGCGCA GGGAGGAATA TCCGCTGCGC TTGGAAATGC AGAAAAGGAT TCTTCCGAAT GGCATGCCTA TGACACCATA AAAGGCTCTG ACTATCTTGC CGATCAGTAT GCTGTCGAGG TTATGTGCAA TGATGCGCCG AGAGCGATAA TAGAACTGGA ACATCTCGGC GTCCCGTTTT CGCGCTTTGA AGACGGTCAT ATCGCACAGC GTCCTTTTGG CGGCCATACA AAAAATTTCG GAGAGGCCCC GGTCCGACGA ACCTGCTATG CTGCCGACAG AACCGGTCAT GTCTGTCTTC ATACCCTCTA TGAGCAGGCG GTAAAAGATA AGGTCTTTTT TTATGACGAG TACCAGGTGC TCGATCTCTG CATGGCGGAC GGGGCGGTCA ACGGCGTTGT CGCTATCGAA TTGAAAACAG GACGGTTTCT GCTGTTTCAT GCCCGGGCGG TGATGTTTGC CACAGGAGGG TACGGCAAGG CATGGAAAAC AACTTCCAAT GCGTTTGCCA ATACCGGCGA CGGTCTGGGT ATTGTCCTGA ATAACGGCAT TCCGCTGCAG GATATGGAGT TCGTGCAGTT TCACCCGACA GGTCTCTATC CGCTCGGAAT TCTTATTACC GAGGCGGCAA GAGGCGAAGG GGGTGTGCTC CGAAACGCCG ACGGAGAACG GTTTATGGAG CGCTACGCTC CGACGATCAA GGACCTTGCC CCACGGGACA TTGTCAGCCG GAGCATCTAT GATGAGCTGA AGGAAGGGAG AGGTGCCGGA CCGATGAAAG ATCACGTGCT GCTTGATCTG ACCGCTCTTT CGAGAGAGGC GATTGCTGAA AAACTGCCTG AAATTGAGTC TTTTTCCAGA ATATATCTCG GCATTGACCC CTCTGTCACC CCGATACCGG TGTCGCCGAC GTGCCATTAT GCGATGGGAG GAATCCCTAC CGATGTGAAC GGCAGGGTGC TCATTGACGC ACAAGGAAAA GAGCTTCCGG GGTTCTGGGC TGCCGGAGAG GTCGCCTGTG TCTCGGTACA CGGGGCTAAC CGGCTCGGAT CAAATTCGCT GCTTGATCTT ATTGTTTTCG GACGCCGCGC AGGAAAGGAT ATCAACCGGT TCCTTGATCG TGTTCTCCTG AAGCCCCGTC CTCTTGATAC AGGAGCGCTT GAAAAGGTCA GCAGGAAGAT AGAGGGCTTA CTGGGCAGAA AAGAGGGGGA AACGGTAGCG GCGGTTCGTA CCGATCTGCA GAAGGTGATG ATGGACAAGG TTTCTGTTTT CCGTAACGAG CACGGGCTTG CGGCGGCGGT GGAAGAGCTT GCCGTTCTGC AGGGGCGTGC CGCAGGAATC CGGGTGAAGG ACCAGAGCAA GGTTTTCAAC ACTGAGATTC TCGAAGCGCT GGAACTGCAG CATATGGTAA ACTACTCGAA AGCGGTCGCT CTGTGCGCCC TCAAACGTCA GGAGTCGAGA GGGGCGCACA GCAGAGATGA TTATCCTCTG CGAGATGATG AAAACCACCT GAAACATTCT CTTTTTTTTC TCAAAGAAAA TGGAGAAGCG GTCTACGAAC AGAAACCGGT CGATCTTTCG CTTGCTTCGA CCAGGCCTGA ATTCGTGCCC AAAGAAAGAA AGTACTGA
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Protein sequence | MQVVYHDVII VGAGLAGLRA AVELSGKHDV AVLSKLHPLR SHSGAAQGGI SAALGNAEKD SSEWHAYDTI KGSDYLADQY AVEVMCNDAP RAIIELEHLG VPFSRFEDGH IAQRPFGGHT KNFGEAPVRR TCYAADRTGH VCLHTLYEQA VKDKVFFYDE YQVLDLCMAD GAVNGVVAIE LKTGRFLLFH ARAVMFATGG YGKAWKTTSN AFANTGDGLG IVLNNGIPLQ DMEFVQFHPT GLYPLGILIT EAARGEGGVL RNADGERFME RYAPTIKDLA PRDIVSRSIY DELKEGRGAG PMKDHVLLDL TALSREAIAE KLPEIESFSR IYLGIDPSVT PIPVSPTCHY AMGGIPTDVN GRVLIDAQGK ELPGFWAAGE VACVSVHGAN RLGSNSLLDL IVFGRRAGKD INRFLDRVLL KPRPLDTGAL EKVSRKIEGL LGRKEGETVA AVRTDLQKVM MDKVSVFRNE HGLAAAVEEL AVLQGRAAGI RVKDQSKVFN TEILEALELQ HMVNYSKAVA LCALKRQESR GAHSRDDYPL RDDENHLKHS LFFLKENGEA VYEQKPVDLS LASTRPEFVP KERKY
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