Gene Cphamn1_2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2514 
Symbol 
ID6376212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2682709 
End bp2684466 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content54% 
IMG OID642684992 
Productsuccinate dehydrogenase, flavoprotein subunit 
Protein accessionYP_001960889 
Protein GI189501419 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID[TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.136164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTG TCTATCATGA TGTGATCATT GTCGGTGCGG GTCTCGCAGG TCTCAGGGCG 
GCGGTCGAAC TTTCCGGAAA ACACGACGTT GCGGTACTTT CAAAACTTCA TCCGCTCCGG
TCGCATTCGG GGGCGGCGCA GGGAGGAATA TCCGCTGCGC TTGGAAATGC AGAAAAGGAT
TCTTCCGAAT GGCATGCCTA TGACACCATA AAAGGCTCTG ACTATCTTGC CGATCAGTAT
GCTGTCGAGG TTATGTGCAA TGATGCGCCG AGAGCGATAA TAGAACTGGA ACATCTCGGC
GTCCCGTTTT CGCGCTTTGA AGACGGTCAT ATCGCACAGC GTCCTTTTGG CGGCCATACA
AAAAATTTCG GAGAGGCCCC GGTCCGACGA ACCTGCTATG CTGCCGACAG AACCGGTCAT
GTCTGTCTTC ATACCCTCTA TGAGCAGGCG GTAAAAGATA AGGTCTTTTT TTATGACGAG
TACCAGGTGC TCGATCTCTG CATGGCGGAC GGGGCGGTCA ACGGCGTTGT CGCTATCGAA
TTGAAAACAG GACGGTTTCT GCTGTTTCAT GCCCGGGCGG TGATGTTTGC CACAGGAGGG
TACGGCAAGG CATGGAAAAC AACTTCCAAT GCGTTTGCCA ATACCGGCGA CGGTCTGGGT
ATTGTCCTGA ATAACGGCAT TCCGCTGCAG GATATGGAGT TCGTGCAGTT TCACCCGACA
GGTCTCTATC CGCTCGGAAT TCTTATTACC GAGGCGGCAA GAGGCGAAGG GGGTGTGCTC
CGAAACGCCG ACGGAGAACG GTTTATGGAG CGCTACGCTC CGACGATCAA GGACCTTGCC
CCACGGGACA TTGTCAGCCG GAGCATCTAT GATGAGCTGA AGGAAGGGAG AGGTGCCGGA
CCGATGAAAG ATCACGTGCT GCTTGATCTG ACCGCTCTTT CGAGAGAGGC GATTGCTGAA
AAACTGCCTG AAATTGAGTC TTTTTCCAGA ATATATCTCG GCATTGACCC CTCTGTCACC
CCGATACCGG TGTCGCCGAC GTGCCATTAT GCGATGGGAG GAATCCCTAC CGATGTGAAC
GGCAGGGTGC TCATTGACGC ACAAGGAAAA GAGCTTCCGG GGTTCTGGGC TGCCGGAGAG
GTCGCCTGTG TCTCGGTACA CGGGGCTAAC CGGCTCGGAT CAAATTCGCT GCTTGATCTT
ATTGTTTTCG GACGCCGCGC AGGAAAGGAT ATCAACCGGT TCCTTGATCG TGTTCTCCTG
AAGCCCCGTC CTCTTGATAC AGGAGCGCTT GAAAAGGTCA GCAGGAAGAT AGAGGGCTTA
CTGGGCAGAA AAGAGGGGGA AACGGTAGCG GCGGTTCGTA CCGATCTGCA GAAGGTGATG
ATGGACAAGG TTTCTGTTTT CCGTAACGAG CACGGGCTTG CGGCGGCGGT GGAAGAGCTT
GCCGTTCTGC AGGGGCGTGC CGCAGGAATC CGGGTGAAGG ACCAGAGCAA GGTTTTCAAC
ACTGAGATTC TCGAAGCGCT GGAACTGCAG CATATGGTAA ACTACTCGAA AGCGGTCGCT
CTGTGCGCCC TCAAACGTCA GGAGTCGAGA GGGGCGCACA GCAGAGATGA TTATCCTCTG
CGAGATGATG AAAACCACCT GAAACATTCT CTTTTTTTTC TCAAAGAAAA TGGAGAAGCG
GTCTACGAAC AGAAACCGGT CGATCTTTCG CTTGCTTCGA CCAGGCCTGA ATTCGTGCCC
AAAGAAAGAA AGTACTGA
 
Protein sequence
MQVVYHDVII VGAGLAGLRA AVELSGKHDV AVLSKLHPLR SHSGAAQGGI SAALGNAEKD 
SSEWHAYDTI KGSDYLADQY AVEVMCNDAP RAIIELEHLG VPFSRFEDGH IAQRPFGGHT
KNFGEAPVRR TCYAADRTGH VCLHTLYEQA VKDKVFFYDE YQVLDLCMAD GAVNGVVAIE
LKTGRFLLFH ARAVMFATGG YGKAWKTTSN AFANTGDGLG IVLNNGIPLQ DMEFVQFHPT
GLYPLGILIT EAARGEGGVL RNADGERFME RYAPTIKDLA PRDIVSRSIY DELKEGRGAG
PMKDHVLLDL TALSREAIAE KLPEIESFSR IYLGIDPSVT PIPVSPTCHY AMGGIPTDVN
GRVLIDAQGK ELPGFWAAGE VACVSVHGAN RLGSNSLLDL IVFGRRAGKD INRFLDRVLL
KPRPLDTGAL EKVSRKIEGL LGRKEGETVA AVRTDLQKVM MDKVSVFRNE HGLAAAVEEL
AVLQGRAAGI RVKDQSKVFN TEILEALELQ HMVNYSKAVA LCALKRQESR GAHSRDDYPL
RDDENHLKHS LFFLKENGEA VYEQKPVDLS LASTRPEFVP KERKY