Gene Cphamn1_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2471 
Symbol 
ID6376166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2637115 
End bp2638101 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content48% 
IMG OID642684948 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_001960846 
Protein GI189501376 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000361805 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACT TATCGACAAC ATACATGGGA TTGAAACTGA AAAATCCTGT TATCGCGGGC 
AGTTCCGGCA TGACAGAATC TGTTGAAAGC GTTACAAAAG CAGCCGATGC AGGCGCGGGC
GCGGTGGTAC TGAAGTCGCT GTTTGAAGAA CAGATTCACA ATGAGTCCGG ATACGCAATT
GACAGTAATG AACAGGACTA CTACTATGCA CAGGCAGAAG AGTATATCCG GAATTACACC
AGGGGAAACG ATCTCAGAGC GTATCTCGAT CTTATCAGCG GTTGTAAGGA TGCAGTTGAT
ATTCCCGTGA TAGCGAGTAT CAATTGTGTT TCCTCTTCAG AATGGACGGA TTTTGCCGTC
CAGGCGCAGC GTGCGGGTGC CGACGGACTG GAGCTGAATA TGTTCATGCT TCCTTCGGAT
CCGGATAGGG ATAGCGGACA GAGTGAGCAG GTGTACCTGG ATGTGCTGGA AAAAGTCACC
GGACTGATCA GCATTCCGGT CGCGGCCAAA ATCAGCTACT ATTTTTCCGG ACTCGCAAAC
ATTGTAGAAA AGATCGCTTC AACCGGTATC AGCGGCCTGG TGATGTTCAA CAGGTTCTTT
TCTCCTGATA TTGATATAGA AAATTTTGAG GTGAAAAGCA CAAATGTCTT CAGTTCTCCC
CAGGACCTTT CGCTGTCGTT ACGATGGGTC GCGATGCTTT CATCCAGGGT TCCATGCGAC
ATAGCTGCCT CGACAGGTAT TCATGACGGA AAAGCACTGA TCAAACAGCT TCTTGCGGGA
GCAAAGGCCG GACAGATCGC CTCTGTACTC TATAGTGAAG GCTATGAGGT GATCAGTCCC
ATGCTTGAGG AGCTCGATGC CTATATGGAA AGGCATAATT TCTCAACTCT TGATGAGATG
ATTGGGAAAA TGAGTTTTGA AAAATCAGGA AACCCGGCTG CATACGAACG AGTGCAGTTT
ATGAAATATT TCAGCGGGAT ATCGTGA
 
Protein sequence
MADLSTTYMG LKLKNPVIAG SSGMTESVES VTKAADAGAG AVVLKSLFEE QIHNESGYAI 
DSNEQDYYYA QAEEYIRNYT RGNDLRAYLD LISGCKDAVD IPVIASINCV SSSEWTDFAV
QAQRAGADGL ELNMFMLPSD PDRDSGQSEQ VYLDVLEKVT GLISIPVAAK ISYYFSGLAN
IVEKIASTGI SGLVMFNRFF SPDIDIENFE VKSTNVFSSP QDLSLSLRWV AMLSSRVPCD
IAASTGIHDG KALIKQLLAG AKAGQIASVL YSEGYEVISP MLEELDAYME RHNFSTLDEM
IGKMSFEKSG NPAAYERVQF MKYFSGIS