Gene Cphamn1_2459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2459 
Symbol 
ID6376154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2620877 
End bp2621866 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content54% 
IMG OID642684936 
Productbiotin/acetyl-CoA-carboxylase ligase 
Protein accessionYP_001960834 
Protein GI189501364 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.472126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGC AGACAGCGGA CATTCTTCAG CGGTTGCGCG CATCGGAAGA GTTTCTTTCG 
GGCGGTCAGC TGTGCCGGGA TTTCGGTATG ACGCGGAGCG CCGTGTGGAA ACACATTTCA
CGGCTTCGGG AGGCCGGATA CTCGATAGAG GCGGTTTCCG GCAGGGGATA CCGGTTGTGT
TCCAGTCCCG ATATTCCGGT ATCCGAGGAA GTTTCCCCGC AGCTGACGAC AACCCGGTTC
GGCAGGAATC TCCTGTTTCA CGAGAAAGTT GATTCAACGA ACATGCAGGC GAAAATCCTT
GCGCGTCAGG GGGCCTCTGA AGGAAGTGTT CTTGTGGCGG ATTGTCAGAC CGGAGGGAGA
GGAAGAATGG GGCGGGAGTG GGTCTCGCCA CCGGGTGCGA ATCTGTATTT TTCGCTTGTC
CTTCGCCCGC CTGTTCCGCC GGTAAGGCTT TCCCAGATAC CGCTTCTTGC AGCAGCAGCT
ATTCACCAGG CGCTTGACAG GACGGTTGAG GGCGTATCTT CGGCGATTAA ATGGCCCAAT
GATATTCTGA TAGAAGGACG GAAGGTTTGC GGGATTCTCT GTGAGATGGA AAGCGAACCC
GATATGACGC ATTTCGTTAT TGTCGGCATA GGCGTCAATG TCAATCTTCG GGATATTCCG
GGAGAAATCA AGGGGATCGC GACATCCCTT TTTCTTGAAT CGGGCAGTGA GTACTCCCGA
CCGGATATTC TGTCTTCCAT ACTCAACAGT TTCGAGCCGC TGTATGACAC GTGGCTGGAG
GCTGACGATC TTTTTGCTGT TCTCCCCTAT CTTGAAAGAT ACGCATGGTT AAAAGACCGG
GAAGTCAAGG TGGAGCAGTA CAAGAGCACT CTTGAAGGGC GTGTTCGGGG TCTGACCAGA
ACGGGCGAAC TAATGCTTGA ATCGCAAGAC GGCAGCATGC ACGCTATTTC TTCCGGCGAA
GCTCGTCTGA GTAAAGGAGT TCAATACTAG
 
Protein sequence
MNQQTADILQ RLRASEEFLS GGQLCRDFGM TRSAVWKHIS RLREAGYSIE AVSGRGYRLC 
SSPDIPVSEE VSPQLTTTRF GRNLLFHEKV DSTNMQAKIL ARQGASEGSV LVADCQTGGR
GRMGREWVSP PGANLYFSLV LRPPVPPVRL SQIPLLAAAA IHQALDRTVE GVSSAIKWPN
DILIEGRKVC GILCEMESEP DMTHFVIVGI GVNVNLRDIP GEIKGIATSL FLESGSEYSR
PDILSSILNS FEPLYDTWLE ADDLFAVLPY LERYAWLKDR EVKVEQYKST LEGRVRGLTR
TGELMLESQD GSMHAISSGE ARLSKGVQY