| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2452 |
|---|
| Symbol | |
|---|
| ID | 6376147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2613533 |
|---|
| End bp | 2614741 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642684929 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001960827 |
|---|
| Protein GI | 189501357 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2521] Predicted archaeal methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.280378 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCAG AAGAATTCCA CCAGCTCCAG CTTCCTGAAG TCCGGGATTT TCTGGAAAAG
CATCTCGATG ACGACCCTGC CCTGTTTGCG ATGAAGCATC ATCACCTGAA AGGCCTTCCT
GTCAGGGCTA TTGCCGAACA GATCGCATGC AGGCGAAAGG CGCATAATAA ATTGCCGGAG
CTTTCGAAGC ATAATCTGTT CTATACCTCC CTCGCGCTTG AACAGGCTTC GGGTGAAAGA
GCTGCCTGCT ATAAGTCGGG ATTGCAGGGT ATGTCAGGCA CAAGACTCCT GGATATGAGT
GGGGGGCTGG GGATCGATAC CATCTTTTTT GCGGAGCGGT TCGATGAGGT TGTCTATTGC
GAGCGTGACG CGGTTGTCGC GAAGATCGCG GAGCACAACT TCAGGGAGTT GGGCATCAGT
AACGTAACGG TGATTCATGG CGACAGCGTC AAGACTCTTG AAACCTTTCC TGATGAGTCG
TTCGACCTGA TATTTATTGA TCCTGCACGG CGTGAGAAGG GTCGGCGATC GGCAGCTCTT
GAAGCAGGAA GTCCTGACGT GGTTTCACTG CACGACCTGC TGCTTCGAAA AGCGCATCGA
TTCTGTGTCA AGGCGTCACC GGCTCTGGAA ATTGACGGTA TCGAGGCAAA ACTGCCTTCG
CTTTTTCAGG TGATCGTGTT GTCTGTTGAG AGGGAGTGCA AGGAGATACT GCTCTTTTGC
CGAAGAGAGC ACGATGCAGG GAAGCCTTTG GTCGTCAAAG CGGTGAGCCT GAAAGGTGAT
AAAGAAAACG TTATCGTTTC AGAAGCCGGG TGTCAGCCGC AGAAACATAT CGCTCCGACT
CCGGGAAGAT ATCTCTATGA ACCCGATCCG GCAATAATCA AAGCACGCCT GACAGCCTTT
GCCGCGGCTC AGTATGGTCT GCAGTTCATC AATTCCAGGA TTGACTATCT GACCTCTGAC
AGGGAAATTG GAGACTTTCA CGGCAGGTCG TTCAGAATTA TTACAACGAT TTTCTTCAAA
CCGGGACGGT TTACAACGTT TCTCAAAGAA CAGGGGATAG AATCGGCCAG CATCCTTCGT
CGTGATTTTC CGCTATCGCC TGATGAGATA CGGCGGAGAT ACCGTCTTCG AGAAAACAAA
GAGACGTTTC TGATTTTCAC CAAAGACATT TCCGGCAGGC TTCTTTGTCT GTTGTGCGAT
CGTACATAA
|
|---|
| Protein sequence | MTAEEFHQLQ LPEVRDFLEK HLDDDPALFA MKHHHLKGLP VRAIAEQIAC RRKAHNKLPE
LSKHNLFYTS LALEQASGER AACYKSGLQG MSGTRLLDMS GGLGIDTIFF AERFDEVVYC
ERDAVVAKIA EHNFRELGIS NVTVIHGDSV KTLETFPDES FDLIFIDPAR REKGRRSAAL
EAGSPDVVSL HDLLLRKAHR FCVKASPALE IDGIEAKLPS LFQVIVLSVE RECKEILLFC
RREHDAGKPL VVKAVSLKGD KENVIVSEAG CQPQKHIAPT PGRYLYEPDP AIIKARLTAF
AAAQYGLQFI NSRIDYLTSD REIGDFHGRS FRIITTIFFK PGRFTTFLKE QGIESASILR
RDFPLSPDEI RRRYRLRENK ETFLIFTKDI SGRLLCLLCD RT
|
|---|
| |