Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2446 |
Symbol | |
ID | 6376141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2608806 |
End bp | 2609432 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642684924 |
Product | NLP/P60 protein |
Protein accession | YP_001960822 |
Protein GI | 189501352 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACCA GAACATCTAC ACTGAGAACA TCCTGCCCGA CACACTATCG GGGTTTGCGA CAGGTATTGT GCTGGACGCT CCTTTGTACT CTGGCGCTTT TTTCCGGTTG CACAGGAAGC CATTCAGCTC AAGGCGTTAA ATATAGTGGA AAAAACACAA AAAAATATAC GCCGCTGCCT ATCAGTGTTC ACGAAGATAA ACTTATTGAA CTGCTTGAAA ACATCAGCAG TCTGCTGGGC ATTGAGTATC ACTACGGCGG ACAATCAGTA ACGGGATTCG ATTGTTCCGG CTTTGTCAAC TATATCTATA AGGACACGTT TAAAGCATAC CTCCCGAGAA CATCACAGGA GCTTGCGCGA AGAGGAAAAA AAATTTCGCT CCAAAACCTT AAAAGGGGAG ACCTTGTTTT TTTCAGGCTC AACAGTTCAC GCATAAACCA TGTTGGCATT TATCTTGAAA ATAACCTGTT CGCACATGCA TCATCAAGCA GGGGAGTCAC CATGACAAGT CTCAACAACG GATACTACAA AAAACATTTT GTCAAAGCCC TGCGCCTGCT TGAAATCATG GATACCGGCA CCGCTGATGG AGAACCGCGG CATGCACGTA CCGATATATC GGATTAA
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Protein sequence | MGTRTSTLRT SCPTHYRGLR QVLCWTLLCT LALFSGCTGS HSAQGVKYSG KNTKKYTPLP ISVHEDKLIE LLENISSLLG IEYHYGGQSV TGFDCSGFVN YIYKDTFKAY LPRTSQELAR RGKKISLQNL KRGDLVFFRL NSSRINHVGI YLENNLFAHA SSSRGVTMTS LNNGYYKKHF VKALRLLEIM DTGTADGEPR HARTDISD
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