Gene Cphamn1_2446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2446 
Symbol 
ID6376141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2608806 
End bp2609432 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content45% 
IMG OID642684924 
ProductNLP/P60 protein 
Protein accessionYP_001960822 
Protein GI189501352 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACCA GAACATCTAC ACTGAGAACA TCCTGCCCGA CACACTATCG GGGTTTGCGA 
CAGGTATTGT GCTGGACGCT CCTTTGTACT CTGGCGCTTT TTTCCGGTTG CACAGGAAGC
CATTCAGCTC AAGGCGTTAA ATATAGTGGA AAAAACACAA AAAAATATAC GCCGCTGCCT
ATCAGTGTTC ACGAAGATAA ACTTATTGAA CTGCTTGAAA ACATCAGCAG TCTGCTGGGC
ATTGAGTATC ACTACGGCGG ACAATCAGTA ACGGGATTCG ATTGTTCCGG CTTTGTCAAC
TATATCTATA AGGACACGTT TAAAGCATAC CTCCCGAGAA CATCACAGGA GCTTGCGCGA
AGAGGAAAAA AAATTTCGCT CCAAAACCTT AAAAGGGGAG ACCTTGTTTT TTTCAGGCTC
AACAGTTCAC GCATAAACCA TGTTGGCATT TATCTTGAAA ATAACCTGTT CGCACATGCA
TCATCAAGCA GGGGAGTCAC CATGACAAGT CTCAACAACG GATACTACAA AAAACATTTT
GTCAAAGCCC TGCGCCTGCT TGAAATCATG GATACCGGCA CCGCTGATGG AGAACCGCGG
CATGCACGTA CCGATATATC GGATTAA
 
Protein sequence
MGTRTSTLRT SCPTHYRGLR QVLCWTLLCT LALFSGCTGS HSAQGVKYSG KNTKKYTPLP 
ISVHEDKLIE LLENISSLLG IEYHYGGQSV TGFDCSGFVN YIYKDTFKAY LPRTSQELAR
RGKKISLQNL KRGDLVFFRL NSSRINHVGI YLENNLFAHA SSSRGVTMTS LNNGYYKKHF
VKALRLLEIM DTGTADGEPR HARTDISD