| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2444 |
|---|
| Symbol | |
|---|
| ID | 6376139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2606217 |
|---|
| End bp | 2607203 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642684922 |
|---|
| Product | phosphoribosylaminoimidazole synthetase |
|---|
| Protein accession | YP_001960820 |
|---|
| Protein GI | 189501350 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTACA AGACGGCAGG AGTTGATATC AGTGCTGGAG AAGAGTTTGT CCGATTGATC
AAGCCGGAGG TGCGTCAGAC CTTTACCAGT GGTGTTCTGA CCGATATCGG CGCGTTCGGG
GGTTTTTTTC AGCCTGATTT TTCCTCATAT ACGAGTCCTG TGCTGGTCAG CAGTATAGAC
GGAGTCGGTA CGAAACTGAA GGTTGCGGCG GAAATGGGGC GATATGACAC CATTGGCGCC
TGTCTGGTGA ATCACTGTGT GGATGATATT CTTGTGTGTG GCGCGAAACC GTTGTTTTTT
CTTGACTACT ATGCTTGTGG GAAGCTTATA CCCGAAATGG CAGCGGATAT TGTCAAGGGA
ATGGTTGCGG CATGCAAAGA GAACTCCTGT GCTCTCATCG GAGGTGAAAC CGCTGAAATG
CCCGGGGTTT ACGCCACAGA TGATTTTGAT CTCGCAGGGA CGATTGTCGG TGTTGTCGAC
CAGAGCAGAA TCATTAACGG CGCGGCAATA TCCGAGGGAG ACGTCATGAT AGGGATTGCC
TCGAACGGAT TGCATACAAA CGGCTTCTCT CTGGCTCGCA AGGTTTTCGA GGGAAAGCTT
CGACATACAT TTGAGGGACT TGAAGGCAGT GTCGGTGATG AGCTTCTGAA GGTTCACCGC
TCGTATCTTC CAGCAATCGG GCCACTGCTT TCTTCAGAAG ATATTCACGG TATGTCTCAT
ATTACAGGAG GAGGTCTGAC AGGAAACACC ATGCGGATTA TACCCGACGG CCTCCGGCTT
GATGTCGACT GGAAATCCTG GCCGGAGCCG GTGATTTTCG ATATCATACG TAAAGAGGGA
AGGGTTCCCG AAGAGGATAT GCGAAGAACC TTTAATCTTG GCGTAGGCCT GGTGATGATT
GTCGCCGAAT CGTCCGTTGA GGGCATAATG GAGGATTTGA CATCGAAGCA GGAAAATGCT
TACATTATAG GCCGGGTCGT TGCCTGA
|
|---|
| Protein sequence | MDYKTAGVDI SAGEEFVRLI KPEVRQTFTS GVLTDIGAFG GFFQPDFSSY TSPVLVSSID
GVGTKLKVAA EMGRYDTIGA CLVNHCVDDI LVCGAKPLFF LDYYACGKLI PEMAADIVKG
MVAACKENSC ALIGGETAEM PGVYATDDFD LAGTIVGVVD QSRIINGAAI SEGDVMIGIA
SNGLHTNGFS LARKVFEGKL RHTFEGLEGS VGDELLKVHR SYLPAIGPLL SSEDIHGMSH
ITGGGLTGNT MRIIPDGLRL DVDWKSWPEP VIFDIIRKEG RVPEEDMRRT FNLGVGLVMI
VAESSVEGIM EDLTSKQENA YIIGRVVA
|
|---|
| |