Gene Cphamn1_2435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2435 
Symbol 
ID6376130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2596845 
End bp2597603 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content52% 
IMG OID642684913 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_001960811 
Protein GI189501341 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTAC ACCATCCATC CTGCAAGTTA TCCCCCTTCG GGAACGTACC TGTCACGAAG 
TTCATTATCT CATGCAGCCT GGTACTCTTC CTCTCCTCCT GCGCTGAAAG AGAAGACCCT
CTTGAGGGAA GCTGGAAAAT CCCCGGAAAA GAAGTCATTC TGGAGTTCAG AAACGACGGC
TCGCTATCCC GGAGCATCGC TTCAAAAACA ACAACGGGAA CATACCGCAG AGATGGAGAG
GGAAATCTTT TTCTCGATCT GGGAAAAGGA GAACTGCGCG CAGAGCTTTC AGGATCGGGT
AAAGAACTTA CTCTGAACGA CAACGGAAAT ACAAGACTGC TGTTCCTCAG AAAGCAGACC
GCCGCCCGGG TCGACAGCGC TCAGGCCATA TTCAACATGG GTTTTGACAT CAGGGACTGC
GACTCTTCCA TTTCCCTGTA CTCAACGGTG ATTTCGCTGC TCAAAGCAAT CCCCTCCGAA
AAAGGGCACC TTGCAAGAGC GTATAACAAC CGGGGAATCT GCAAGGAAAA AAACGGCAAC
CTGGAAGCAG CCGTTGCTGA CTACGGCAAG GCAATCGCAC TGGATCCCGA TCTTGATATT
GCCTACGGCA ACCGCGCATG GCTCTACGAG AGCGTCGGCA TGAAGGATAA AGCCGCTTCC
GATTACAGGA AAGCCGCCGA ACTCGGTTAT CGCCCTGCGA TCTACTGGAT CGAACAGCAA
AAAAAGCTGG AAGAAGAAAA ACCTGGCACG GAGGAGTGA
 
Protein sequence
MQLHHPSCKL SPFGNVPVTK FIISCSLVLF LSSCAEREDP LEGSWKIPGK EVILEFRNDG 
SLSRSIASKT TTGTYRRDGE GNLFLDLGKG ELRAELSGSG KELTLNDNGN TRLLFLRKQT
AARVDSAQAI FNMGFDIRDC DSSISLYSTV ISLLKAIPSE KGHLARAYNN RGICKEKNGN
LEAAVADYGK AIALDPDLDI AYGNRAWLYE SVGMKDKAAS DYRKAAELGY RPAIYWIEQQ
KKLEEEKPGT EE