| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2431 |
|---|
| Symbol | |
|---|
| ID | 6376126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 2591902 |
|---|
| End bp | 2592768 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642684909 |
|---|
| Product | Prephenate dehydrogenase |
|---|
| Protein accession | YP_001960807 |
|---|
| Protein GI | 189501337 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0287] Prephenate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA CCTGTATCAA CAGTATCGCA ATCATAGGAC TTGGCTTAAT AGGTGCATCC
GTCCTCAGAG CGCTGAAAAA GTCACCGCTT GCTGCAGAAC AGCATATCCT TTTTAAGGGA
TACGACCCCT CCTTCACTGA AAAGGATGTT CTGCACATAG AGAATTTTGG TCTTGACCAG
TTTCAACAGG ATAAAAAAGC TCTCTATGAT GCTGATCTTA TCATCCTCGC CGCGCCGGTC
GAAACAAATA TTCTCCTGCT GGATGAAATA CGTGATCTTG CCCCGAAGCA GGCACTTGTC
AGTGACGTTT CAAGTACGAA AGCCGCCATC GCAAACCGTG CCGCCGAACT GAACCTTGCT
TTTATCGGTA TGCACCCGAT TGCCGGACGG GAACAGCAAG GCTATCACGC GAGTCATGAC
GAACTTCTCG CCGGAAAAAC CGTGGTCATC TGCGCTGACA GGCATACCAT TTCCCGGCCC
GACGCCGCTA ACGTCATTGC GCTTCTTGAG TCTATCAAAT GCCGGATTGC CCTCATGACC
CCTGAAGAGC ATGACAGAAT TGTCGCTACG GTAAGCCATC TGCCCCAAAT GCTTTCAACA
GCCCTCGTCA ACTATTGCGA AAACGACATG GATAAAAGCG GCCCGGGCTT TTCAACACTG
ACACGGCTTG CCGGCAGTTC CTGGGAGATC TGGAGAGATA TTGTATCGAC AAACAGGGAG
AACATTGCGA CGGAACTTGA ACAGTTCAGC AGAGAACTCG AACAACTGGC GGATGATGTC
CGCAACAACA GGGCAGACAG AATCAGAGAA CGGTTCGAAC ACGCTAACAC ACTCTACGAA
ACACTCAAAG AGAACAGCAA CTCATGA
|
|---|
| Protein sequence | MQKTCINSIA IIGLGLIGAS VLRALKKSPL AAEQHILFKG YDPSFTEKDV LHIENFGLDQ
FQQDKKALYD ADLIILAAPV ETNILLLDEI RDLAPKQALV SDVSSTKAAI ANRAAELNLA
FIGMHPIAGR EQQGYHASHD ELLAGKTVVI CADRHTISRP DAANVIALLE SIKCRIALMT
PEEHDRIVAT VSHLPQMLST ALVNYCENDM DKSGPGFSTL TRLAGSSWEI WRDIVSTNRE
NIATELEQFS RELEQLADDV RNNRADRIRE RFEHANTLYE TLKENSNS
|
|---|
| |