Gene Cphamn1_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2428 
Symbol 
ID6376123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2588719 
End bp2590152 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content51% 
IMG OID642684906 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001960804 
Protein GI189501334 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAGG TTGCGATAAT TGGTGCCGGG TTTGCAGGTC ATACTGCCGC GATGTATCTG 
GGTGATTCAT TGGGCAAAGA TCATGAAATA ACGGTTATAC ACAAGTTTGA TTATTTCGGT
TTTGTCCCTT CATGGGTTTG GCTGGGCATC GACGCGGTTA AGGCTGAAGA GACCTGCTTC
AAGTTGAAAC CGATCTATGA CAGGTTCAAT GTGAACTTTG TTCAGGGCAA GGTTACTTCC
GTTCACCCCG AAGAAAATTA CGTTGTGGTC GATCAGGCCA ACGGAGGCTG CGAGGCCAGC
GTGGCGTATG ATTACCTCAT AGTCGCTACA GGTGCTCATA TGAACTATAA GGCCACGCCC
GGACTTGGCC CGGATAAATT CACCGAATCG ATATGTCACT TCGATACAGC GGTCAAAGCT
CGTGACTCCT ATCTTCAGCT TGTTGAAAAG ATGAAGAAAG GTGAAAAGCA GCGTCTGGTT
ATCGGCACCG GTCACCCAAT GGCCGCCTGC CAGGGTGCGG CGTTCGAGTA TATCACCAAT
ATTCATACAG ATCTTACACA GCGCGGAATC AGGGACAAGG CTGATCTTGT CTACCTTACC
AATGAACCGG CAATCGGTGA TTTCGGCGTC GGCGGCATCA ATGTTGTCAA GCAGGGGGGC
AGAATTGCCC GTGGAGGCGA CCTCATTGAA GATCTCATGG AGGAGTTCGG ACTGGAAAAA
GGAGTTCGAC GGGGGGTCAA GGAGGTTGAC GAGAAGAAGA TCTACTGGGA AGACTTCGAA
GGGAACTTCG GTGAGGATGA GTATGATTTC GCGATGCTGA TCCCGCAGTC GCGCGGTGTG
ACGTTTCCTT TCTTCAACAA GGCGGGAGAG GATATTTCCT CACAGGTCAC CAATCCCGGT
GGGTTCATTT TAGCTGACGG TATTTATGGC CTGAGCTATG ATGAACTGGT CAAAACGCCT
GATGCATGGC CCGCCAACTA TCAGAACCCT CTTTTCAAAA ACATCTTTTC GGCAGGTATC
GCGTTTGCTC CTCCCGGATC TATTTCCGTG CCACATACCA CGAAAAACGG AACAACGATC
ACTCCTGGCG CTCCGAGAAC AGGTATGATT TCCGGTGTTA TCGGTCGAAT TGTTGCGTTG
AACATCATCG ACCTTATCAA TGGAGGTCGT ATGACTCACC GTGAACGCAT GTCCGAGATG
CTGGCTGTCT GTATCGCGTC AAACGGTAAA TCACTCTGGA ACGGTCAGGC GACCGTCATG
ATCATCTATC CTGTCGTACC GGATCACACC CGTTATGACA ACAAGGAAGG ACGGGATCTT
TTTGTTACCA GAGTTGAGCG GGGACTTGCG GGCGCATGGC TGAAGCAGAT GGTTGAAACA
ACCTTCATGC ACAAGTTCAA AGGCCGCATC GGCTGGCAGC TTATTCCCGA GTAA
 
Protein sequence
MAKVAIIGAG FAGHTAAMYL GDSLGKDHEI TVIHKFDYFG FVPSWVWLGI DAVKAEETCF 
KLKPIYDRFN VNFVQGKVTS VHPEENYVVV DQANGGCEAS VAYDYLIVAT GAHMNYKATP
GLGPDKFTES ICHFDTAVKA RDSYLQLVEK MKKGEKQRLV IGTGHPMAAC QGAAFEYITN
IHTDLTQRGI RDKADLVYLT NEPAIGDFGV GGINVVKQGG RIARGGDLIE DLMEEFGLEK
GVRRGVKEVD EKKIYWEDFE GNFGEDEYDF AMLIPQSRGV TFPFFNKAGE DISSQVTNPG
GFILADGIYG LSYDELVKTP DAWPANYQNP LFKNIFSAGI AFAPPGSISV PHTTKNGTTI
TPGAPRTGMI SGVIGRIVAL NIIDLINGGR MTHRERMSEM LAVCIASNGK SLWNGQATVM
IIYPVVPDHT RYDNKEGRDL FVTRVERGLA GAWLKQMVET TFMHKFKGRI GWQLIPE