Gene Cphamn1_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2354 
Symbol 
ID6376049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2522534 
End bp2523436 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content50% 
IMG OID642684838 
ProductBile acid:sodium symporter 
Protein accessionYP_001960736 
Protein GI189501266 
COG category[R] General function prediction only 
COG ID[COG0385] Predicted Na+-dependent transporter 
TIGRFAM ID[TIGR00841] bile acid transporter 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCA TACATCGTCA TTTTCTTACC ATAGCCGTAG GGGCGTCGAT CGTTGCCCTT 
GCTGTTCCGG AAATTTTTTT ATGGATTAAA CCGTTCATTC CGCTCTTGCT TGGAGTTATC
ATGTTCGGCA TGGGCACGAC AATCCGCTTT CATGACTTCA GGGATGTCTG GGAAAAAAGA
AACGTGATTT TTCTTGCGGC ACTGATTCAG TATACCGTTA TGCCGGGTCT TGCCGTTCTC
ATCAGCTTCG TGATGTCGTT ACCTGAGGAA GTCATGATCG GCATGGTGCT CGTCGGGAGC
TGTCCCGGAG GAACCGCATC AAATGTGATT GTCTATCTTG CGAAGGGTAA TGTCGCACTT
TCGGTGACCA TGACCATGTT TTCCACCCTG CTTGCGCCTC TGCTTACTCC GGGAATCATC
TATCTGATTC TCAGCAGGTC GATTGAATTT TCCTTTGGCG GGTTGTTTCT CTCGGTGTTT
CAGATCGTTG CTCTTCCTCT TTTTGCCGGG CTTCTTGCAA GGAGGTTATT CAGCAGCACG
GTTGACCGTT ACAGTGACAA TCTGCCGGTT ATATCTGTTG TCTCTATTTC CCTGATCATT
GCCTGTGTCA TGGCCTTGAA CGCTGACAGT GTGCTTGCTT TCCCTGTCCT GACAATAGCG
GCTGTGATGC TGCATAATCT GTCCGGCCTT GTTTCAGGGT ATGGCGTGGC TAAATTGTTC
GGGAGCAATC GAGTCGATTG CAGAACGATA GCCATCGAGA TCGGTATGCA GAACTCCGGT
CTCGGTGTGG CGCTGGCCAA TCAGTTCTTT CAGCCTCTTT CCGCGCTGCC CGGCGCGATA
TTCAGTCTTT GGCACAATCT TTCGGGAATC GTGCTCGCGA GGTTCTGGGG CGGGAGGGAA
TAA
 
Protein sequence
MNTIHRHFLT IAVGASIVAL AVPEIFLWIK PFIPLLLGVI MFGMGTTIRF HDFRDVWEKR 
NVIFLAALIQ YTVMPGLAVL ISFVMSLPEE VMIGMVLVGS CPGGTASNVI VYLAKGNVAL
SVTMTMFSTL LAPLLTPGII YLILSRSIEF SFGGLFLSVF QIVALPLFAG LLARRLFSST
VDRYSDNLPV ISVVSISLII ACVMALNADS VLAFPVLTIA AVMLHNLSGL VSGYGVAKLF
GSNRVDCRTI AIEIGMQNSG LGVALANQFF QPLSALPGAI FSLWHNLSGI VLARFWGGRE