Gene Cphamn1_2315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2315 
Symbol 
ID6376010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2486888 
End bp2488528 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content55% 
IMG OID642684802 
Productferredoxin-dependent glutamate synthase 
Protein accessionYP_001960700 
Protein GI189501230 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0069] Glutamate synthase domain 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.333875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.382299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAACA ATGTTAAGAC AAAAAAAGTT AAAGTTGCAA CATGGAGCAG GCTTGAAGAA 
AAAAAACCGG CATATGCACT TGTTTCCGGC GTCGATCTGG TTGTCATCCG TTTCGGTGAA
GAGGTTTCCG TACTCTACGG AAGATGCCTC CACCGTGGCG CGCTCATGGC AGACGGCTCT
GTTTCAGGCC ATAATCTGCT GTGCGGAGTA CACCGTTGGG ATTACCGTTA CGATACCGGC
GTCAGCGAAT ATGACAACAA GGAAAAACTG CATAAATTCA CCGCGTGGAT TGATAAAAAG
GAAGATGCAG TCTATACCGA CGAAGCGGAG GTGATCGCGT GGTCACGAGA AAACCCACAG
GCATGGGACC GGGAAAGCTA TCAGGGACTA TACGCGGACA TGAAAGGAGG GCCTGAGGAA
CCATTCAACA ACTATATTCA CAGCCTTGCG TCCACTGATC CCTCCACCTT CTCTGCACAC
GGTCCTGTTT CCGCCATGGG CGTCCCCCTT ATCGAACTCC CGCGATGGGA GGATATCCAG
CTCCTGACAG CCCAGCTTTA CCGGTCACCG CTCTTCGACG ACGCACCGGT AGGCACAAAC
CTTGTCATCG GGCCGAACGC CCGAAAGCCG CTTGAACTCA GCATACCTCT CTTTGTCAGT
GACATGAGCT TCGGAGCCCT CAGCAGAGAG ATCAAGATCG CCCTCTCCAG AGGAGCCGAA
CTGTCGGAAA CCGGCATATG TTCCGGAGAA GGCGGCATGC TCGAGGCCGA GCGTGCGGAA
AACTCCCGAT ACTTCTATGA ACTCGCTCCG GGAGAATTCG GCTGGGATAT CGAACAGGTG
ACCCGATGCC AGGCGTTTCA TTTCAAAGCC GGTCAGGCCG CGAAAACCGG CACTGGAGGC
ATGCTGCCGG CAGAAAAGGT CAGTGAGGAG ATCGCAACGG TACGAGGCGT TGCCCCGAAC
ACCAGCGCCG TCTCTCCCTC ACGATTCAGA AAACTTGTCA CTCCCGAAGA CTTTCAAAGG
ATCGCCGAAG AGGTACGCCA GGCCACTGGC GGCATCCCTG TAGGATGTAA ACTGTCCGCC
CAGCATATCG AAAGAGATAT TGACTTTGCC CTTGAGGTTG GTGTCGACTA TATCATCCTT
GACGGAAGGG GCGGCGGCAC AGGCGCATCA CCCGACCTGC TGAAAAACAA TATCGCGGTC
CCGACAATCC CCGCGCTGGC AAGAGCAAGA AAACACCTTG ACACACGCGG AGCCGGTCAT
GTGACGCTCA TCATCACCGG AGGATTACGC ACCGAATCGC ATTTCCTGAA GGCGCTTGCT
CTCGGGGCTG ACGGTATAGC CATAGCCAAC GCCGCGATCC AGGCTGCCGG ATGCCTCGGA
ATGCGCGCCT GTCAAAACAA CAACTGTCCG GTCGGTGTGG CAACACAGGA TAAAAAACTG
CGAGAGAGAA TTGTTATCGA TCGTTCGGCT GAACGTCTGC ACAACTTTCT GCAGAACTCG
GTCAGCATGA TGAAAGTCAT GGCAAGGGCG TGCGGACACA ACCATCTCCG CAAATTCACA
ACGGATGATC TGGTGTCCTG GAAGCAGGAT ATGGCGTCGC TCACAGGAAT ACGGTATGGT
GGCGTTTCCG GCCAGGAATA A
 
Protein sequence
MYNNVKTKKV KVATWSRLEE KKPAYALVSG VDLVVIRFGE EVSVLYGRCL HRGALMADGS 
VSGHNLLCGV HRWDYRYDTG VSEYDNKEKL HKFTAWIDKK EDAVYTDEAE VIAWSRENPQ
AWDRESYQGL YADMKGGPEE PFNNYIHSLA STDPSTFSAH GPVSAMGVPL IELPRWEDIQ
LLTAQLYRSP LFDDAPVGTN LVIGPNARKP LELSIPLFVS DMSFGALSRE IKIALSRGAE
LSETGICSGE GGMLEAERAE NSRYFYELAP GEFGWDIEQV TRCQAFHFKA GQAAKTGTGG
MLPAEKVSEE IATVRGVAPN TSAVSPSRFR KLVTPEDFQR IAEEVRQATG GIPVGCKLSA
QHIERDIDFA LEVGVDYIIL DGRGGGTGAS PDLLKNNIAV PTIPALARAR KHLDTRGAGH
VTLIITGGLR TESHFLKALA LGADGIAIAN AAIQAAGCLG MRACQNNNCP VGVATQDKKL
RERIVIDRSA ERLHNFLQNS VSMMKVMARA CGHNHLRKFT TDDLVSWKQD MASLTGIRYG
GVSGQE