| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2312 |
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| Symbol | gatB |
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| ID | 6376007 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2483148 |
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| End bp | 2484575 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642684799 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001960697 |
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| Protein GI | 189501227 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00554328 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.218132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTATG AATTAGTGGT GGGCCTTGAA GTCCACTGTC AGTTGAACAC GAACAGCAAA
GCGTTCTGCG GTTGTTCGAC AGAGTTCGGT AAACCTGCCA ACACCAATGT ATGCCCGGTG
TGTCTCGCGC TTCCCGGTGC TTTGCCGGTA CTTAACCGTC GTGTTGTCGA AGATGCGGTC
AAGCTTGGAC TGGCTACGGA TTGTACTGTC GCCAGGCAGT CGATCCTTGC CCGGAAAAAC
TATTTTTATC CTGATCTGCC GAAAGGTTAC CAGATATCCC AGTTCGAAGA GCCCATCTGT
TCCGAAGGGA TGGTTTTTGT CGATACGGAT GAGGGGCGGA AAAATATACG ACTGGTCAGA
ATTCACATAG AGGAGGATGC AGGTAAATCA ATACACGATA TCGGTGACGA TACCTTCATC
GATGTCAACC GGTGCGGTGT TCCGCTGCTT GAAATTGTGA GTTATCCCGA TATCCGTTCC
GCCGGTGAGG CGTCGTCGTA TTTGCAGAAG CTTCGCCAGA TCATCAAGTA TCTCGGTATA
TCGGACGGCA ATATGGAAGA GGGCAGTCTT CGCTGTGATG CCAATGTTTC TGTCCGGCTG
ACAGGTGCTG AGGAGTACGG TACGAGGACA GAGATAAAGA ATATGAACTC CTTCAAGAAT
GTTGAAAAGG CGATCGAGTA TGAGGCGAAG CGCCATATCG ACGTTCTGGA GAACGGTGGA
ACGATTTTTC AGGAGACCCG CCTGTGGGAT GCCGACAGGC AGGAGACCCG ATCGATGCGC
GGTAAGGAGT TTGCTCATGA CTATCGATAT TTTCCTGATC CGGATCTGGT GCCGATTGAG
GTTGATGAGG AGATGCTCGA TCGTCTCAAA CAGGAACTCC CCGAGCTTCC CGAGGTGCGC
GCAGAACGAT TTGTCAGGGA AACAGGTATT CCCGCATATG ACGCCGGCGT ACTGACAAGC
GAACGTGAAG TCGCAGACTA TTTCGAAAAG GTTGTCCGCG CTTGCGGTGA CGCAAAGGCG
GCATCCAACT GGGTGATGGG TGAGGTGCTG CGGACACTCA AGGAGAAGAA TATTCCTGTC
GCCCTGTTTT CCGTATCGCC TGAACGTCTG GGAGGCCTTC TCAATCTCAT AGGAAAAGGA
ACGATAAGTA CTACCATCGC CAAACAGGTG TTTGAACGTA TGCTTGAAAC CGGTGATGAT
GCAGCGGCCA TAGTTGAAAA GGAAGGACTT GCCCAGATAT CGGACACTAC CGAGATAGAA
ACGCTTGTTC AGGATATTAT CGAAGCCAAT CCGGGACAGG TGGAGCAGTA CAGGAGCGGA
AAAACCAGGA TTTTCGGTTT CTTTGTCGGC CAGTGTATGA AAGCGATGAA AGGCAAGGCG
AATCCTGTTG TTGTGAATGA AATTTTGAAA CAGAAGCTTG ACGGGTAA
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| Protein sequence | MSYELVVGLE VHCQLNTNSK AFCGCSTEFG KPANTNVCPV CLALPGALPV LNRRVVEDAV
KLGLATDCTV ARQSILARKN YFYPDLPKGY QISQFEEPIC SEGMVFVDTD EGRKNIRLVR
IHIEEDAGKS IHDIGDDTFI DVNRCGVPLL EIVSYPDIRS AGEASSYLQK LRQIIKYLGI
SDGNMEEGSL RCDANVSVRL TGAEEYGTRT EIKNMNSFKN VEKAIEYEAK RHIDVLENGG
TIFQETRLWD ADRQETRSMR GKEFAHDYRY FPDPDLVPIE VDEEMLDRLK QELPELPEVR
AERFVRETGI PAYDAGVLTS EREVADYFEK VVRACGDAKA ASNWVMGEVL RTLKEKNIPV
ALFSVSPERL GGLLNLIGKG TISTTIAKQV FERMLETGDD AAAIVEKEGL AQISDTTEIE
TLVQDIIEAN PGQVEQYRSG KTRIFGFFVG QCMKAMKGKA NPVVVNEILK QKLDG
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