| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2299 |
|---|
| Symbol | |
|---|
| ID | 6375994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2468625 |
|---|
| End bp | 2470739 |
|---|
| Gene Length | 2115 bp |
|---|
| Protein Length | 704 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642684786 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_001960684 |
|---|
| Protein GI | 189501214 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00120894 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000176451 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGGC AAGTTGGTTT AGCGAATGTG CGGAATATAG GCATCATGGC TCACATAGAT
GCAGGAAAGA CGACGACTAC AGAGCGGATT TTGTACTATA CCGGGCGTCT TCACAGGATG
GGTGAGGTTC ATGATGGCGG CGCGACCATG GACTGGATGG AGCAGGAGAA AGAGCGGGGT
ATAACGATTA CTTCGGCGGC CACGACCTGT TTCTGGGAGC CTAAGGGCGG GAACTTTGTC
GATGTCAAAC ATCGCATCAA TATTATTGAT ACTCCCGGTC ATGTTGATTT CACTGTGGAG
GTGGAGCGTT CGCTGAGGGT TCTTGATGGC GCGGTCGCAC TCTTCTGTGC GGTTGGTGGT
GTTGAGCCGC AGTCTGAAAC TGTCTGGCGT CAGGCGAATA AATACAAGGT GCCGAGAATT
GCTTATGTGA ACAAGATGGA TCGTGTCGGT GCTGATTTCT ATGCTGCGGT CAAGGCTGTG
AAAGAGAGGC TCGGTGCGAA TCCGGTGCCG ATTCAGATTC CGATAGGTCA GGGCGAGATT
TTTGCCGGTG TTGTCGATCT GATCCGTATG AAAGGGATTA TTTACGATAA AGAGGATGGC
AGTACCTTTG AAGAGGTAGA GATTCCGCAT GATCTGGAGA CTGAGGCAAA GCATTGGCGG
ATCAATATGC TGGAGGCTGT TTCCGAGGTG GATGAAACGC TTCTGGAGAA ATACCTTGAG
GGAGAAGATA TTACTGAGGC CGAGGTTCGC AAGGTTCTGA GGGAGGCGAC GCTTAACGGC
AGTATCATTC CTGCGCTGTG CGGTTCTTCG TTCAAGAACA AGGGTGTTCA GTTCATGCTC
GACGCGGTTA TCGAATATCT CCCGTCACCG GTTGATGTGG GTTCGGTCAC GGGTCACCAT
CCTGGAGATG ACAGCGGGAT TTCGCGTAAG CCGAGTGATG ATGAACCGTT CGCGGGCCTG
GCGTTCAAGA TCGCTACTGA TCCGTTTGTC GGTAAGCTGA CTTTTTTCCG GGTCTACTCA
GGCGTTCTTG AGGCAGGAAG TTATGTGCTC AACGCGTTGA CCGGAAAGAA AGAGCGTGTC
GGAAGGTTGA TGCAGATGCA CTCCAATAAG AGGGAGGATC GTGACGCGGT GTTTGCGGGT
GATATTGCCG CGGCTGTCGG GCTGAAGGAT GTGAAGACGG GTGATACGCT CTGTGATGCA
GGTAAGCCTA TCGTTCTTGA GAAGATGGTG TTTCCCGAGC CGGTTATACA GATTGCTATT
GAGCCGAAAA CCAAGGCTGA TTCGGACAAG TTGGGTGTTT CTCTCGGAAA GCTTGCTGAA
GAGGATCCTA CCTTCAGGGT CTCCTCTGAC GAAGAAACCG GTCAGACGCT GATAGCCGGT
ATGGGTGAAC TGCATCTGGA GGTGCTGGTT GATCGTCTTA AGCGTGAGTT CAAGGTGGAG
GCCAATGTCG GTCAGCCTCA GGTTGCCTAC CGTGAGACAA TACGTGGTAC GGTTGAGCAT
GAAGGTAAGT TTGTCAGGCA GTCCGGCGGT AAAGGTCAGT TCGGTCTGGT GAATATCAAG
GTTGAGCCTC TTGAAGAGGG TAAGGGGTAT GAATTTGTTG ATGCGATCAA GGGTGGTGTG
GTGCCGAAAG AATATATTCC TGCTGTGTCA GCCGGTATTC AGGAGGCGAT GAAAGATGGT
GTTGTGGCCG GGTATCCTGT TCAGGATGTG AAAGTCACGC TTTACGACGG AAAATACCAT
GACGTCGATT CATCGGAAAT GTCATTTAAG ATCGCGGGTT CCATTGGTTT CAAGGGCGCG
GCGAGAAAAG CCAATCCTGT TCTGCTCGAG CCGATCATGA AGGTTGAGGT TATCACTCCG
GAAGAGTATC TGGGTGATGT GATGGGTGAT CTTTCAAGTC GCAGAGGTCA TATCGACGGT
ATGGGAGAGC GTGCCGGTGC ACAGTTTGTG AAGGCCAGTG TGCCGCTAGC CCAGATGTTC
GGCTATTCGA CAGTTCTTCG TTCCATGACG CAGGGTAGGG CGAATTATAC TATGGAGTTT
GAATGTTACA ATGAAGTGCC GAAAAGTGTA GCGGAAGCGC TTCAGGAAAA GAGCGGTGTG
AAAGGTGACG GTTAA
|
|---|
| Protein sequence | MARQVGLANV RNIGIMAHID AGKTTTTERI LYYTGRLHRM GEVHDGGATM DWMEQEKERG
ITITSAATTC FWEPKGGNFV DVKHRINIID TPGHVDFTVE VERSLRVLDG AVALFCAVGG
VEPQSETVWR QANKYKVPRI AYVNKMDRVG ADFYAAVKAV KERLGANPVP IQIPIGQGEI
FAGVVDLIRM KGIIYDKEDG STFEEVEIPH DLETEAKHWR INMLEAVSEV DETLLEKYLE
GEDITEAEVR KVLREATLNG SIIPALCGSS FKNKGVQFML DAVIEYLPSP VDVGSVTGHH
PGDDSGISRK PSDDEPFAGL AFKIATDPFV GKLTFFRVYS GVLEAGSYVL NALTGKKERV
GRLMQMHSNK REDRDAVFAG DIAAAVGLKD VKTGDTLCDA GKPIVLEKMV FPEPVIQIAI
EPKTKADSDK LGVSLGKLAE EDPTFRVSSD EETGQTLIAG MGELHLEVLV DRLKREFKVE
ANVGQPQVAY RETIRGTVEH EGKFVRQSGG KGQFGLVNIK VEPLEEGKGY EFVDAIKGGV
VPKEYIPAVS AGIQEAMKDG VVAGYPVQDV KVTLYDGKYH DVDSSEMSFK IAGSIGFKGA
ARKANPVLLE PIMKVEVITP EEYLGDVMGD LSSRRGHIDG MGERAGAQFV KASVPLAQMF
GYSTVLRSMT QGRANYTMEF ECYNEVPKSV AEALQEKSGV KGDG
|
|---|
| |