| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2295 |
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| Symbol | rplD |
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| ID | 6375990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2465675 |
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| End bp | 2466301 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642684782 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001960680 |
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| Protein GI | 189501210 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0333756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00351228 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGAACTTA AAGTTTTAAA TACAGGCGGC TCTGAAACCG GTGAAGTCGT AACGCTCAAT
GACGCTGTTT TTTCTGCTGA GGTGTCGGAG CATGCCATGT ATCTTGATGT TAAGTCCATC
ATGGCAAACC GGCGACAGGG TACACACAAG GCAAAGAATC GCTCCGAGGT GCGGGGTGGC
GGACGAAAGC CTTACAGGCA GAAAGGCACC GGACATGCCC GCCAGGGTTC GACCCGATCG
CCTTTGATGA CTGGCGGCGG AACGATTTTC GGTCCTGAGC CGCGTGATTA TGGATTGAAG
GTTAATAAAA AGGTGAAAAA GCTTGCGCGC CGCTCTGCGC TTACAAATAA AGCTAATGAG
GGCGGTATCG TGGTTGTAGA GGACTTTGTC TTCGATCAGA TAAAGACCAG GCAGATGGCT
GAGGTGTTGA AAAATCTCGG TCTTGACAGC AGAAAGACTC TTATGTTAAT GCCGGAGCAT
AACGACATCA TAGTCAGGTC AGGAAGAAAT ATTCCGAAGT TACAGGTCGT TGTTGCTGAT
AATGCCTCCA CATATGACAT ACTCGACAGC CAGACTGTGC TTGTTCAGAA GACTGCGCTG
AAGAAGATAG AGGAAACACT GGGTTAA
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| Protein sequence | MELKVLNTGG SETGEVVTLN DAVFSAEVSE HAMYLDVKSI MANRRQGTHK AKNRSEVRGG
GRKPYRQKGT GHARQGSTRS PLMTGGGTIF GPEPRDYGLK VNKKVKKLAR RSALTNKANE
GGIVVVEDFV FDQIKTRQMA EVLKNLGLDS RKTLMLMPEH NDIIVRSGRN IPKLQVVVAD
NASTYDILDS QTVLVQKTAL KKIEETLG
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