| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2281 |
|---|
| Symbol | rplF |
|---|
| ID | 6375975 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2459201 |
|---|
| End bp | 2459740 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642684767 |
|---|
| Product | 50S ribosomal protein L6 |
|---|
| Protein accession | YP_001960666 |
|---|
| Protein GI | 189501196 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0097] Ribosomal protein L6P/L9E |
|---|
| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000308698 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00356938 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAGAA TAGGAAAAAT GCCAATCAAG CTGGCAGAGC AGGCGAAGAT TGAGATAAAG
GATAACGTTA TCAGCGTTTC AGGTCCGAAA GGAAATCTTG AACAGAGACT GGTACCGGAA
GTTACGGTGG ATATTGCCGA TGGCCAGGTT GCCGTTACAC GTATCGACGA CAGCAAACGG
TCAAGGGCCA TGCACGGTTT GTATAGAATG CTCATCAGCA ACATGCTGGA AGGGGTGACA
AGCGGGTTCA GTAAAAAACT TCTTATCAAC GGTGTCGGTT TCCGCGCGGA GAAAAAAGCG
GAGTTTCTTG CGCTGACTCT CGGGTATTCT CATATGATTT ACTTTAAAGC GCCTGAAGAA
ATAGCTATCG AATGTCCGGA TCCTACATCC ATAGTGGTCA GTGGTATCGA TAAGGCTCTT
GTTGGTCAGG TTGCCGCTAA AATCCGATCA TTCCGTAAGC CTGAACCCTA TCGCGGCAAG
GGTATACGAT ATTCGGATGA GTTTGTACGT CGTAAGGAAG GAAAAACTGC CGGCAAGTAA
|
|---|
| Protein sequence | MSRIGKMPIK LAEQAKIEIK DNVISVSGPK GNLEQRLVPE VTVDIADGQV AVTRIDDSKR
SRAMHGLYRM LISNMLEGVT SGFSKKLLIN GVGFRAEKKA EFLALTLGYS HMIYFKAPEE
IAIECPDPTS IVVSGIDKAL VGQVAAKIRS FRKPEPYRGK GIRYSDEFVR RKEGKTAGK
|
|---|
| |