| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2280 |
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| Symbol | rplR |
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| ID | 6375974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2458787 |
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| End bp | 2459146 |
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| Gene Length | 360 bp |
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| Protein Length | 119 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642684766 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001960665 |
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| Protein GI | 189501195 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000151304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00323172 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGACACG TCGAAAAAGT TGCGCGAAGG CATAAAATCA AAACACGCAG CAAAGCCAGA
GGACAGGGGA CTGTCGAAAA ACCGAGACTT TGCGTATTCA GAAGTTTATC ACAGATTTAT
GTACAGTTGG TCGATGATGT CAATGGAGCT ATCCTGTTGT CTGTTTCGAG CATGTCTAAG
GAGAACAAGG GGCTGAAGGG GACAAAATGC GATATCAGTC GTACGATAGG TAAGCAAATT
GGTGAAAAAG CCGTTCAGAA GGGAATTACA AAAGTGGTTT TCGATCGTAA CGGATTTCGG
TATCATGGCA GAGTACAGGC TCTTGCCGAT GGTGCAAGAG AAGCCGGTCT GGTTTTTTAA
|
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| Protein sequence | MGHVEKVARR HKIKTRSKAR GQGTVEKPRL CVFRSLSQIY VQLVDDVNGA ILLSVSSMSK
ENKGLKGTKC DISRTIGKQI GEKAVQKGIT KVVFDRNGFR YHGRVQALAD GAREAGLVF
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