| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2269 |
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| Symbol | |
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| ID | 6375963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 2452311 |
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| End bp | 2453297 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 642684755 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001960654 |
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| Protein GI | 189501184 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.32742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0326788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATACC AAATGCAGAT GCCTGAGAAA ATCGATGTCG ATGAAGGTAC ACATAATGAT
AAAAACGGAA TATTTATAGC GCAGCCGCTT GAGCGTGGCT ATGGTGTGAC ATTGGGCAAT
GCAATGCGCA GAGTGCTTCT TGCTTCTCTG CCGGGTACGG CTATTACCGG AATTAAAATT
GATGGTGTTT TCCATGAGTT CTCCGCAATA GACGGGGTGC GTGAGGATGT ACCGGATATT
ATTCTGAACC TTAAAAAAGT ACGGTTCAGA TCTTCAACCA AGAGGAGTTG TAAAACGACT
GTGACAGTGG ACGGTCCTGC AGATGTGACC GCAGGAGATA TTGTCGCACA GGAAGGCGAA
TTTGAAGTAC TGAACACCGA TCTGCATATA GCTACGGTAA ATGAAGGGTC GAGGCTGAGC
ATGGATGTGT ATATCGGGCG GGGCAGAGGG TATGTTCCGG CTGAGGACAA CCGCGGTGAC
GGGATGCCTT TAGGATTTAT CGCAATCGAT TCGATCTTTA CTCCTATTAA AAACGTTAAA
TTCTCAGTCG AGAATACACG TGTGGGACAG CGTACCGATT ACGAGAAAAT GATACTCGAT
GTAGAGACAG ACGGTTCTGT ATCACCTGAT GATTCGATCA GCCTTGCAGG CAAGATCATC
AACGAGCATG TTTCACTGTT TGCGAACTTT TCGCCGACGG ATGAAGAGTT TACCGAAGAG
GAATACAAAC AGCAGGACGA TGAGTTTGAA AACATGCGTA AAATGCTCCT GACACGAATT
GAAGATCTGG ATCTTTCCGT TCGTTCTCAT AACTGCTTGA GGCTTGCTGA AATAGATACA
CTTGGTGATC TTGTTTCCCG CAAAGAAGAT GAGCTTCTGA CCTACAAGAA TTTTGGTAAA
AAGTCCTTGA CTGAGCTGAA AGAGCAGTTG GAGAAGTTTG AGTTGAAGTT TGGTATGGAT
ATTACCAAAT ATCAGATGAA AGGCTAA
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| Protein sequence | MIYQMQMPEK IDVDEGTHND KNGIFIAQPL ERGYGVTLGN AMRRVLLASL PGTAITGIKI
DGVFHEFSAI DGVREDVPDI ILNLKKVRFR SSTKRSCKTT VTVDGPADVT AGDIVAQEGE
FEVLNTDLHI ATVNEGSRLS MDVYIGRGRG YVPAEDNRGD GMPLGFIAID SIFTPIKNVK
FSVENTRVGQ RTDYEKMILD VETDGSVSPD DSISLAGKII NEHVSLFANF SPTDEEFTEE
EYKQQDDEFE NMRKMLLTRI EDLDLSVRSH NCLRLAEIDT LGDLVSRKED ELLTYKNFGK
KSLTELKEQL EKFELKFGMD ITKYQMKG
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