Gene Cphamn1_2241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2241 
Symbol 
ID6375935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2426351 
End bp2427343 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content53% 
IMG OID642684728 
ProductROK family protein 
Protein accessionYP_001960627 
Protein GI189501157 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID[TIGR00744] ROK family protein (putative glucokinase) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGAT GGGCGTTGGG GGTAGATCTT GGGGGGACGG CGGTAAAAAT TGCCGTTATC 
GATGAAGATG CGGGTATGCT TGAGCATGAA CGGCATCCGA CGAAGCTCGA TGAGGGACCG
GAAGGTATTG TCGGTCAGAT AGGATCGCTT GTTTTCTCGG TGTACGGACG ATTCAGAAAT
CGTCTCGGGG AAGAGGGATT TGCCGGTATA GGGCTTGGCG CTCCGGGAGC TGTTGACAGC
GAGCGGGGTA TGCTCAGCTA CCCTCCCAAC CTGCCGGGCT GGGAACACTA TGCGTTGAAA
AGTGAATTGC AGAAGCTTCT CATCAGGGAT TATGCAATGG ACTGTTTGCT GATTCTTGAA
AATGACGCCA ATATAGCTGC CTGCGGAGAA GCCGTGTTCG GTGCAGGCAG AGCGTTCAGC
GATTTTATGA TGGTCACCCT CGGAACGGGA GTCGGGGGAG GAATACTGCT GAATCGTAAA
CTCTATAGAG GGCCGAACGG CACGGCAGGT GAGATCGGTT ATCTGACGAT TGATTTCGGT
GGAAAAAGCG TTCATGCCGG TGTCAGGGGG ACGGTCGAAA GTCTTATAGG CAAAAAAAGC
ATTGTTGACA TGGCCCTCGA TACCTACCGC CTTCATGGGC GGGAGAAGTG GTCCGAAGAA
ATACATGGCA GCAATCTGTG CGATCTTTCT CCGAGAACGC TTGAAAAAGC CGCACATCAT
GGCGATCCTG TCGCCGGAGA AATATGGGAC AGGGTGGGCT CTATTCTCGG CGTTGGACTG
GCTGGGGTGG TCGCATTGAT GGATATCCGT AAATTCGTTC TTGGCGGCGG GATTTCAGGT
GCGGGTAACC TCATTTTTTC TCCTGCATTT GACCAGATGA AGCGATCTAC GCTGCCTTCG
ATGCATGATG GTCTGGAGCT GGTGCCCGCT GCCCTCGGAA ATGACGCTGG AGTCTATGGT
GCAGCCGCGC TCTGCTTTTC TTCTCTTCTT TGA
 
Protein sequence
MSRWALGVDL GGTAVKIAVI DEDAGMLEHE RHPTKLDEGP EGIVGQIGSL VFSVYGRFRN 
RLGEEGFAGI GLGAPGAVDS ERGMLSYPPN LPGWEHYALK SELQKLLIRD YAMDCLLILE
NDANIAACGE AVFGAGRAFS DFMMVTLGTG VGGGILLNRK LYRGPNGTAG EIGYLTIDFG
GKSVHAGVRG TVESLIGKKS IVDMALDTYR LHGREKWSEE IHGSNLCDLS PRTLEKAAHH
GDPVAGEIWD RVGSILGVGL AGVVALMDIR KFVLGGGISG AGNLIFSPAF DQMKRSTLPS
MHDGLELVPA ALGNDAGVYG AAALCFSSLL