| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_2220 |
|---|
| Symbol | |
|---|
| ID | 6375914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 2406471 |
|---|
| End bp | 2406866 |
|---|
| Gene Length | 396 bp |
|---|
| Protein Length | 131 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 642684707 |
|---|
| Product | PilT protein domain protein |
|---|
| Protein accession | YP_001960606 |
|---|
| Protein GI | 189501136 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3744] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCG TTGATACGCA TGTGATACTA TGGGATGCCC TTAAGCCGGA GATGTTGAGT
GGTAAGGCGA AAAGAGCATT AGCGGAAGCT AACCGAACTG ACGGTATTTT TTTCTGCTCG
ATCTCCCTGT GGGAAATAGC GATGCTGATC AGGAAAAAAA GGATCGAGAT CAGCGTTCCC
TATAGGGATT TTGTTGATCT TCTGTTATCG TCCAACAGGT ATTTTTTTCA GGAGATAACC
CCTGAAATAG CGTATCTTTC AACAACATTG CCTGATACGA TCAACGGCGA TCCGGCAGAC
AGGATCATTG CGTCTTCATC CCTCATTACA AAAACTTCGC TGATAACTGC CGACGAGAAT
CTCCGGCAGT CGGAACTGCT GCAGACAATA TGGTAA
|
|---|
| Protein sequence | MITVDTHVIL WDALKPEMLS GKAKRALAEA NRTDGIFFCS ISLWEIAMLI RKKRIEISVP
YRDFVDLLLS SNRYFFQEIT PEIAYLSTTL PDTINGDPAD RIIASSSLIT KTSLITADEN
LRQSELLQTI W
|
|---|
| |