Gene Cphamn1_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2188 
Symbol 
ID6375882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2366909 
End bp2368183 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content47% 
IMG OID642684675 
Productpeptidase M16 domain protein 
Protein accessionYP_001960574 
Protein GI189501104 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.344972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.666529 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCATG ACAATCTTTG TATTTCAGCC GGGCAGGTTA TTGAAAATAA TCTCCAAAAC 
GGTCTCCGGG TAGTCAGTAA CTATACTCCC CATGTCAATA CTATAACGCT GGGTATCTGG
ATCAACGCAG GCTCAAGAGA GGATCCCGAA AAATTATCCG GTCTCTCTCA TTTTCTCGAA
CACGCTGTTT TCAAAGGAAC GCATTCAAAA GATCATCTGG CCATTTCACG ATGCATCGAG
CAGGTAGGCG GCTATATTGA CGCATATACG ACAAAGGAGA ACACCTGCAT CTACATTCGC
TGTCTCAAAG AACATCGGGC GCTTGCATTT GATCTTCTTT CAGACATGAT CTGCAACCCA
TCTTTCCCCG AAGATGAGAT AGAAAAAGAA AAAGCCGTAG TCATAGAAGA AATTCACGGC
ATTAACGACT CGCCTGAAGA GCTCATCTTC GATCAGTTCG ATACCCTCGC GTTTCCCCAC
CACCCTCTCG GTCCGACAAT CCTCGGCACG GAAAAAACCG TAAACAGGAT CACAACCGGC
TCACTGCGGA AATTCATGCG CCAGCATTAT GTCGCCGAAA ACATGCTTGT CACGGCAGTT
GGCAACATAT CGCATGAAGA GATCATGCTG CTCGCCGAAA AAAGTTTTTC AGGGCTCAAC
ACCCGCCCAT CATCTTCCGG TACTGCAAGG ACGTTCCGGC AGGAAGATTA CCATCCTTTT
CACCTTAAAA GGAAAAAACC GCTTTACCAG ACCCAGTTGC TTTACGGCAT GGCGGTTCCC
CGGAACGATA CATTCTTTTA CAGCCTTCTC CTGCTCAACA CCCTTCTCAG CGGAGGTATG
AGCTCCATAC TCAGTCTTGA ACTGAGAGAA CACAACGCTT TGGCATACAA TGCCTACTCA
TCGCTCACTT TTTTTGACGA CGCCACGCTG CTGAATATCT ATGCGGCAAC AGATCCGGAG
AATACAGAGA AAGCACTCCT GATCATCAAA AACGTCCTCA ATGCGGAGAA CATTTCAAAA
ATCTCCCGGG AAGAACATCA GGCGGCAATA AACAAACTGC GCGGCGGGAT GCTGATGGAG
ATGGAAAAAA TGATCCAGAG AATGTCAAAA GCTGCAAGAG ATATCTTCTA TTTCGGAAAA
GCTGTCGAAC TGGAAGAAAA AATCAGCCGC ATTGACAACA TAACCCCCGA TGATCTGGGG
TATGCTGCAG AATATCTGCA ACAGCATACA GAGGCGTCCA CACTGTTGTA CGAACCGGAT
GAGGATATGC GCTGA
 
Protein sequence
MQHDNLCISA GQVIENNLQN GLRVVSNYTP HVNTITLGIW INAGSREDPE KLSGLSHFLE 
HAVFKGTHSK DHLAISRCIE QVGGYIDAYT TKENTCIYIR CLKEHRALAF DLLSDMICNP
SFPEDEIEKE KAVVIEEIHG INDSPEELIF DQFDTLAFPH HPLGPTILGT EKTVNRITTG
SLRKFMRQHY VAENMLVTAV GNISHEEIML LAEKSFSGLN TRPSSSGTAR TFRQEDYHPF
HLKRKKPLYQ TQLLYGMAVP RNDTFFYSLL LLNTLLSGGM SSILSLELRE HNALAYNAYS
SLTFFDDATL LNIYAATDPE NTEKALLIIK NVLNAENISK ISREEHQAAI NKLRGGMLME
MEKMIQRMSK AARDIFYFGK AVELEEKISR IDNITPDDLG YAAEYLQQHT EASTLLYEPD
EDMR