Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2183 |
Symbol | |
ID | 6375877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2360569 |
End bp | 2361618 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642684670 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_001960569 |
Protein GI | 189501099 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0306509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.940701 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACAA ACAAGGAAGC AGAGAACATA ATGAGCAGTA CAGAAAAAAC ATACAGTATA GCGATTCTGG GGGCAACGGG CCTTGTCGGC AGAACCATGC TGCAGGTGCT GGATGAACGT GATTTTCCGG TACGCGAAAT TCTGCCGCTT GCCTCGGAGA GAAGCCGGGG CAGGGAGATT GTCTTCAGGG GAAAATCTTT CAGGACAGAT GTGCCTTCTG CAGAAGTATT CAGCAGGGCT GACATCGCGC TTTTCTCGGC CGGTGCTACA GCAAGCAGAA CCTGGGCTTC GGTAGCAGCG GAAGCGGGCG CGGTGGTTAT CGATAATTCT TCGGCATTCC GTATGGAGCC GGACGTTCCT CTGGTGGTGC CTGAAGTCAA TCCGGAGGCC ATTTTTGACG TTCAAGGCAA GCCGAAAGGC GTTATTGCCA ATCCCAACTG TTCAACCATA CAGATGGTGG TTGTTCTCAA GCCTTTGCAT GACAGATATC GTGTGAGGAG AGTTGTTGTC TCGACCTATC AGTCCGTTAC CGGTAAAGGA AAGCAGGGAC GTGACGCGCT TGAGGATGAG CTTGCCGGTA AAATGCCGGA ATCTTTTGTG CATGGTCATC AGATCGCTTT CAATGCAGTG CCGCATATCG ATGTTTTTCT CGATAACGGC TATACCAAAG AAGAGATGAA AATGGTCAAC GAGACACGCA AAATCATGTG TGATGAATCT CTGAGCGTCT CTCCGACAAC GGTTCGCATT CCTGTGTACG GAGGGCATGG GGAATCAATG AATATTGAAT TCGAGGATGA CTTCGACGTC GATGAGCTCC GCGAGATGCT TGCGGGAACA CCGGGTATAA TCGTTCAGGA CGATCCTTCT TCAGGCCTCT ATCCCATGCC GCTTACTTCC TATGAAAAAG ACGAGGTATT CGTCGGGCGC ATACGGAGGG ATTTCTGGCA GCCGAAAACA GTGAACCTGT GGATCGTTGC CGACAATTTG CGTAAAGGCG CGGCAACCAA CGCGGTACAG ATTGCTGAAA AACTGGTCGG AAAGCTATGA
|
Protein sequence | MTTNKEAENI MSSTEKTYSI AILGATGLVG RTMLQVLDER DFPVREILPL ASERSRGREI VFRGKSFRTD VPSAEVFSRA DIALFSAGAT ASRTWASVAA EAGAVVIDNS SAFRMEPDVP LVVPEVNPEA IFDVQGKPKG VIANPNCSTI QMVVVLKPLH DRYRVRRVVV STYQSVTGKG KQGRDALEDE LAGKMPESFV HGHQIAFNAV PHIDVFLDNG YTKEEMKMVN ETRKIMCDES LSVSPTTVRI PVYGGHGESM NIEFEDDFDV DELREMLAGT PGIIVQDDPS SGLYPMPLTS YEKDEVFVGR IRRDFWQPKT VNLWIVADNL RKGAATNAVQ IAEKLVGKL
|
| |