Gene Cphamn1_2183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2183 
Symbol 
ID6375877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2360569 
End bp2361618 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content51% 
IMG OID642684670 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001960569 
Protein GI189501099 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0306509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.940701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAA ACAAGGAAGC AGAGAACATA ATGAGCAGTA CAGAAAAAAC ATACAGTATA 
GCGATTCTGG GGGCAACGGG CCTTGTCGGC AGAACCATGC TGCAGGTGCT GGATGAACGT
GATTTTCCGG TACGCGAAAT TCTGCCGCTT GCCTCGGAGA GAAGCCGGGG CAGGGAGATT
GTCTTCAGGG GAAAATCTTT CAGGACAGAT GTGCCTTCTG CAGAAGTATT CAGCAGGGCT
GACATCGCGC TTTTCTCGGC CGGTGCTACA GCAAGCAGAA CCTGGGCTTC GGTAGCAGCG
GAAGCGGGCG CGGTGGTTAT CGATAATTCT TCGGCATTCC GTATGGAGCC GGACGTTCCT
CTGGTGGTGC CTGAAGTCAA TCCGGAGGCC ATTTTTGACG TTCAAGGCAA GCCGAAAGGC
GTTATTGCCA ATCCCAACTG TTCAACCATA CAGATGGTGG TTGTTCTCAA GCCTTTGCAT
GACAGATATC GTGTGAGGAG AGTTGTTGTC TCGACCTATC AGTCCGTTAC CGGTAAAGGA
AAGCAGGGAC GTGACGCGCT TGAGGATGAG CTTGCCGGTA AAATGCCGGA ATCTTTTGTG
CATGGTCATC AGATCGCTTT CAATGCAGTG CCGCATATCG ATGTTTTTCT CGATAACGGC
TATACCAAAG AAGAGATGAA AATGGTCAAC GAGACACGCA AAATCATGTG TGATGAATCT
CTGAGCGTCT CTCCGACAAC GGTTCGCATT CCTGTGTACG GAGGGCATGG GGAATCAATG
AATATTGAAT TCGAGGATGA CTTCGACGTC GATGAGCTCC GCGAGATGCT TGCGGGAACA
CCGGGTATAA TCGTTCAGGA CGATCCTTCT TCAGGCCTCT ATCCCATGCC GCTTACTTCC
TATGAAAAAG ACGAGGTATT CGTCGGGCGC ATACGGAGGG ATTTCTGGCA GCCGAAAACA
GTGAACCTGT GGATCGTTGC CGACAATTTG CGTAAAGGCG CGGCAACCAA CGCGGTACAG
ATTGCTGAAA AACTGGTCGG AAAGCTATGA
 
Protein sequence
MTTNKEAENI MSSTEKTYSI AILGATGLVG RTMLQVLDER DFPVREILPL ASERSRGREI 
VFRGKSFRTD VPSAEVFSRA DIALFSAGAT ASRTWASVAA EAGAVVIDNS SAFRMEPDVP
LVVPEVNPEA IFDVQGKPKG VIANPNCSTI QMVVVLKPLH DRYRVRRVVV STYQSVTGKG
KQGRDALEDE LAGKMPESFV HGHQIAFNAV PHIDVFLDNG YTKEEMKMVN ETRKIMCDES
LSVSPTTVRI PVYGGHGESM NIEFEDDFDV DELREMLAGT PGIIVQDDPS SGLYPMPLTS
YEKDEVFVGR IRRDFWQPKT VNLWIVADNL RKGAATNAVQ IAEKLVGKL