Gene Cphamn1_2165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2165 
Symbol 
ID6375859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2342309 
End bp2342626 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content42% 
IMG OID642684652 
ProductCRISPR-associated protein Cas2 
Protein accessionYP_001960551 
Protein GI189501081 
COG category 
COG ID 
TIGRFAM ID[TIGR01873] CRISPR-associated endoribonuclease Cas2, E. coli subfamily 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0152401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATTG TTGTTGCTAA TGATATTCCG CCTGCAGTAA GGGGGCGAAT GAAACTCTGG 
TTTGTGGAGC CGCGAGCAAA TGTTTTTGTT TCTGGAATAA AAGATTCTGT TGCTAAAAAA
GTAATTGACT ATTTGCATAA ACACTGTCCG TCTGAATCCG GACTTATGGT GTTCAAAAGT
TGCAATGAAG CACCAGGATA TGAGATTTTC GGCCATGGTG ATACTCGTAA GCAGTTGATT
GAACTTTCAG GAATGCAACT CGTCATTGAG AAGCATTCTG AACCCAATCG AGCATCAAAA
ACATTAACGG GCGGCTGA
 
Protein sequence
MVIVVANDIP PAVRGRMKLW FVEPRANVFV SGIKDSVAKK VIDYLHKHCP SESGLMVFKS 
CNEAPGYEIF GHGDTRKQLI ELSGMQLVIE KHSEPNRASK TLTGG