Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2161 |
Symbol | |
ID | 6375855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2338968 |
End bp | 2339594 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642684648 |
Product | CRISPR-associated protein, Cse3 family |
Protein accession | YP_001960547 |
Protein GI | 189501077 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0169878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCAA GTATACTTCG CCTTGGCCCG AAAGAGATAA AGGCTCTGCG TATCACCGAT GACTATTCGC TGCACAGGGT TGTCTACAGT CTCTTTGAAG ACCGGAGAAG CGAAGCTGAA AAAAATGCCA GTATTCCGAG CGGCTTTCTC TATGCCGACA AGGGAGGCGA CAGCAACGGT AGACTTATAC TCATGCTTTC AGATCGAGAA CCTCGCAAAC CGGAGCATGG GCGGTTAGAA TCGAAACCGA TTGACGAAAC TTTTCTGATG TTTGACCGTT ATCGGTTCTC TGTCGTCATC AATCCCTCCA GACGTGAAAG CAAAAGTCGC AAGATCATAG CTATACGGGA TCGAAACGAG ATTGCCCAAT GGTTCAGCCA AAAAGCTCCA GCATCGTGGG GATTTACGGT TAACCCTGTA ACACTCGAAG TCCGAACACT TCAAGCAAAA CAATTCGTCA AAAAAGAGCA TTGTGTCACA CAAAATGGAG CGGAATTGAC CGGAGAACTT GACGTGGTTG ACCGCACTCT TTTCATTAAA AGTTTTAAGC AAGGCATCGG ACGTGGCAGG GCTTTTGGCT TTGGTCTGCT TCAGATAGCC CCATTAAAAG TATCAATCAC CAACTAA
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Protein sequence | MIASILRLGP KEIKALRITD DYSLHRVVYS LFEDRRSEAE KNASIPSGFL YADKGGDSNG RLILMLSDRE PRKPEHGRLE SKPIDETFLM FDRYRFSVVI NPSRRESKSR KIIAIRDRNE IAQWFSQKAP ASWGFTVNPV TLEVRTLQAK QFVKKEHCVT QNGAELTGEL DVVDRTLFIK SFKQGIGRGR AFGFGLLQIA PLKVSITN
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