Gene Cphamn1_2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2161 
Symbol 
ID6375855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2338968 
End bp2339594 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content47% 
IMG OID642684648 
ProductCRISPR-associated protein, Cse3 family 
Protein accessionYP_001960547 
Protein GI189501077 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0169878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAA GTATACTTCG CCTTGGCCCG AAAGAGATAA AGGCTCTGCG TATCACCGAT 
GACTATTCGC TGCACAGGGT TGTCTACAGT CTCTTTGAAG ACCGGAGAAG CGAAGCTGAA
AAAAATGCCA GTATTCCGAG CGGCTTTCTC TATGCCGACA AGGGAGGCGA CAGCAACGGT
AGACTTATAC TCATGCTTTC AGATCGAGAA CCTCGCAAAC CGGAGCATGG GCGGTTAGAA
TCGAAACCGA TTGACGAAAC TTTTCTGATG TTTGACCGTT ATCGGTTCTC TGTCGTCATC
AATCCCTCCA GACGTGAAAG CAAAAGTCGC AAGATCATAG CTATACGGGA TCGAAACGAG
ATTGCCCAAT GGTTCAGCCA AAAAGCTCCA GCATCGTGGG GATTTACGGT TAACCCTGTA
ACACTCGAAG TCCGAACACT TCAAGCAAAA CAATTCGTCA AAAAAGAGCA TTGTGTCACA
CAAAATGGAG CGGAATTGAC CGGAGAACTT GACGTGGTTG ACCGCACTCT TTTCATTAAA
AGTTTTAAGC AAGGCATCGG ACGTGGCAGG GCTTTTGGCT TTGGTCTGCT TCAGATAGCC
CCATTAAAAG TATCAATCAC CAACTAA
 
Protein sequence
MIASILRLGP KEIKALRITD DYSLHRVVYS LFEDRRSEAE KNASIPSGFL YADKGGDSNG 
RLILMLSDRE PRKPEHGRLE SKPIDETFLM FDRYRFSVVI NPSRRESKSR KIIAIRDRNE
IAQWFSQKAP ASWGFTVNPV TLEVRTLQAK QFVKKEHCVT QNGAELTGEL DVVDRTLFIK
SFKQGIGRGR AFGFGLLQIA PLKVSITN