Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2160 |
Symbol | |
ID | 6375854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 2338438 |
End bp | 2338971 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642684647 |
Product | CRISPR-associated protein, Cse2 family |
Protein accession | YP_001960546 |
Protein GI | 189501076 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.013441 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAACG AACCTGAAAC AAAAATCAGC AGGTCTCAGG CATTTGTGAG TTTCATTATT ACCCTCATCA AGCAGAACAA GGGAACTTCC GCAGCATTAC GCCGAGCAGA TAACCCTGCG ACCGAATACC AAAGCTGGGA ATATTTGGCA GCCTTCAATA TTGACCTGGA AAAGCCGTGG GAAAGATTGC CGTTTGCTGC GGTTGCCGCA GCGATTGCAA AATCCAAAAT CGAGAAAAAC GGCTCGATTG GTATAGGAAA CGCCATTGCC CGCTGTTATG AGGATGGGAA TCAAAATGAT CAGGCAAAAG CTAAACTGCG ACGCCTGCTT GCTTGCGACT CCGTCGAGGA AGTATGCAGA ATTCTTCGCC CTTTGTTCAG TTTGTTCGAA TCCAGAGGAG TTACCCCAAT TAACTATGCA GGGTTGCTTG AGCAACTGCT GAAATTTCAT TGGGACAGCC AGAGAATCAA AACGCAATGG GCACAGGAAT TCTACAGGCA AAATCAGAAA ATAGAAACAA AGGAGGCTGT ATGA
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Protein sequence | MNNEPETKIS RSQAFVSFII TLIKQNKGTS AALRRADNPA TEYQSWEYLA AFNIDLEKPW ERLPFAAVAA AIAKSKIEKN GSIGIGNAIA RCYEDGNQND QAKAKLRRLL ACDSVEEVCR ILRPLFSLFE SRGVTPINYA GLLEQLLKFH WDSQRIKTQW AQEFYRQNQK IETKEAV
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