Gene Cphamn1_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_2160 
Symbol 
ID6375854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp2338438 
End bp2338971 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content46% 
IMG OID642684647 
ProductCRISPR-associated protein, Cse2 family 
Protein accessionYP_001960546 
Protein GI189501076 
COG category 
COG ID 
TIGRFAM ID[TIGR02548] CRISPR system CASCADE complex protein CasB/Cse2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.013441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACG AACCTGAAAC AAAAATCAGC AGGTCTCAGG CATTTGTGAG TTTCATTATT 
ACCCTCATCA AGCAGAACAA GGGAACTTCC GCAGCATTAC GCCGAGCAGA TAACCCTGCG
ACCGAATACC AAAGCTGGGA ATATTTGGCA GCCTTCAATA TTGACCTGGA AAAGCCGTGG
GAAAGATTGC CGTTTGCTGC GGTTGCCGCA GCGATTGCAA AATCCAAAAT CGAGAAAAAC
GGCTCGATTG GTATAGGAAA CGCCATTGCC CGCTGTTATG AGGATGGGAA TCAAAATGAT
CAGGCAAAAG CTAAACTGCG ACGCCTGCTT GCTTGCGACT CCGTCGAGGA AGTATGCAGA
ATTCTTCGCC CTTTGTTCAG TTTGTTCGAA TCCAGAGGAG TTACCCCAAT TAACTATGCA
GGGTTGCTTG AGCAACTGCT GAAATTTCAT TGGGACAGCC AGAGAATCAA AACGCAATGG
GCACAGGAAT TCTACAGGCA AAATCAGAAA ATAGAAACAA AGGAGGCTGT ATGA
 
Protein sequence
MNNEPETKIS RSQAFVSFII TLIKQNKGTS AALRRADNPA TEYQSWEYLA AFNIDLEKPW 
ERLPFAAVAA AIAKSKIEKN GSIGIGNAIA RCYEDGNQND QAKAKLRRLL ACDSVEEVCR
ILRPLFSLFE SRGVTPINYA GLLEQLLKFH WDSQRIKTQW AQEFYRQNQK IETKEAV