Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2118 |
Symbol | |
ID | 6375812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2294239 |
End bp | 2294847 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642684609 |
Product | outer surface protein, putative |
Protein accession | YP_001960508 |
Protein GI | 189501038 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000793309 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0018778 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAACAAT GTATTCGTGT GTGTGCGGTA TTGCTGGTGC TTCTTGTGTC AGCACCACTT GCTCAGGCGG CAACCCCTTA TGTCAGTGCA TCGGCTGGTT TGGGACTGCT CGCTGATTCG GATTTCACTG ACAATACAGG TATTGTCAGT GACGCTGTTG ACTATAAGAC AGGCTACACC GTCTCAGGGG CTGTCGGTCT GGATGCGGGA ACGCTCAGAC TTGAAGCTGC GCTTGGTTAC CAGGTAAACG ATCTTGATGG CATTTCAGGA GTTCTTGGCC CCGACCCCGA CAATACCAGG CTCGACATTC TTTCCCTGAT GGCTAACGGA TATCTCGATG TTGAGGTGCC TCTGTCGATG ATTACTCCCT ATCTCATGGC CGGAGGAGGT CTTGCCAATG TGTCCTTCGA TTACGGGGAC GGCAACAGTG ACGACGATAC GGTTCTGGCA TATCAGCTTG GGGCTGGCGT AGGGTTTACC GGCATGCCCA ACGTGGTGAT CGATCTCGGT TACCGCTACT TTGCGACCAC GGATTTCACC CCTGAAGATC CTTTCTCATT CACGATAGCC AGTCATAACA TCGTCGCCGG TGTTCGTTTT GGTTTCTGA
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Protein sequence | MKQCIRVCAV LLVLLVSAPL AQAATPYVSA SAGLGLLADS DFTDNTGIVS DAVDYKTGYT VSGAVGLDAG TLRLEAALGY QVNDLDGISG VLGPDPDNTR LDILSLMANG YLDVEVPLSM ITPYLMAGGG LANVSFDYGD GNSDDDTVLA YQLGAGVGFT GMPNVVIDLG YRYFATTDFT PEDPFSFTIA SHNIVAGVRF GF
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