Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2115 |
Symbol | |
ID | 6375809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2291296 |
End bp | 2292435 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642684606 |
Product | glycosyl transferase group 1 |
Protein accession | YP_001960505 |
Protein GI | 189501035 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0564866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0238358 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATAG CTCTCTATGC CGGGACCTAC GTAAAAGATA AAGACGGGGC GGTAAGGACC ATGTATCAAC TTGTGACCTC GTTTCTGAAA GAAGGGCACG AGGTTGTTGT ATGGTCGCCT GATATTTCTT CAGATGACCC CCGTCAGGAG ACGGTGATCG CTATGCCTTC CGTTCCGATC CCCCTTTACC CTGACTATCG TCTCGGTTTT TATACAGCGG CAACTGAAAA GCAGCTGGAT GAGTTCATGC CGGACATTGT TCAGATTTCC ACACCTGATA TCATAGGTCG CAGGTTTCTG AAGTATGCAG GGAAACGGGG CCTTCCGGTT GTCAGCGTCT ATCACACCGA TTTTCCTTCC TATCTTTCCT ATTACCACCT CGGGTTTGCA GAAAATGTGG TGTGGAAGTA TTTGCGGAAG TTCTACAATG CCTGCGATAG CCTGTTTGTT CCGACAAAGC AGATGAAATC CAGGCTCGAA TCCAGAGGGA TGGAACACGT TGAAATCTGG GGAAGGGGAA TCGACAGAGA GTTGTTCAAC CCCTCCCGAA GGTCTGCTTC ACGTCGTGAT ACCTGGGGTG CGGGAAGCAA GACGGTCATA GCGTATGCCG GAAGATTTGT CTGGTACAAG GATATTCATA TGGTGATCGC TGTCTATGAG CGCTTCATGA AGAGCGATCT TTCCGGTGAC GTTCTTTTTG TCATGATTGG CTCAGGGCCT GAAGAGGATG AACTGCGTCG AAGAATGCCT GAAGCTGTAT TTCCCGGATA CCTTGTCGGC ACCGATCTGC CTGAAGCGTA TGCCAGCAGC GATCTGATGC TTTTCCCTTC GACAACCGAG GCTTTCGGCA ATGTCGTTCT TGAAGGTTTT TCCTCCGGTA TTCCCGTCGT GGTGTCAAAT GAAGGTGGCT GTCAGGAGCT GGTCGAGCGG GCAGATGGAG GGTTTGTGGC TGAAGCGGGT GATCAGGATC AGTTTTATGA CTATTGCGTC CGGCTGATAA AGGACAGGGA GCTTTTCGAG AGGAAGCGTC AAAACGGACT CGCATTCGCC GAAACCATGT CCTGGCCGGT TATCAACGGA GCGCTTATAA AGCGTTACAG GGAGATTATC GGGAGGAAGG CAGAAAAAGG CAAAGGGTAA
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Protein sequence | MKIALYAGTY VKDKDGAVRT MYQLVTSFLK EGHEVVVWSP DISSDDPRQE TVIAMPSVPI PLYPDYRLGF YTAATEKQLD EFMPDIVQIS TPDIIGRRFL KYAGKRGLPV VSVYHTDFPS YLSYYHLGFA ENVVWKYLRK FYNACDSLFV PTKQMKSRLE SRGMEHVEIW GRGIDRELFN PSRRSASRRD TWGAGSKTVI AYAGRFVWYK DIHMVIAVYE RFMKSDLSGD VLFVMIGSGP EEDELRRRMP EAVFPGYLVG TDLPEAYASS DLMLFPSTTE AFGNVVLEGF SSGIPVVVSN EGGCQELVER ADGGFVAEAG DQDQFYDYCV RLIKDRELFE RKRQNGLAFA ETMSWPVING ALIKRYREII GRKAEKGKG
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