Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_2109 |
Symbol | |
ID | 6375803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 2284149 |
End bp | 2284835 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642684600 |
Product | protein of unknown function DUF541 |
Protein accession | YP_001960499 |
Protein GI | 189501029 |
COG category | [S] Function unknown |
COG ID | [COG2859] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.184422 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCCT TTTTTATTAC CCATGTGAAT TATTCAGGTT ATGTAGTATC TGAAGGATTT ACTCGTTTCA AGGCGTTTGA AAGGACGGTT GTTGTGAAAG GATTGGCCGA GCGCGAAGTA TCCGCAGATA TAGCTATCTG GCCCGTCACG TTTACCGTCG CGGCTGATGA TCTTTCCTTT CTGGTCGCGA CCCTGCAAGA CCAGAACGAC GTTGTCGTTG CTTTTCTCAG GCAGAAGGGT ATAGCTCAAC AAGAGATTTC GGTATCCGCA CCTTCAATTA TCGATCGTCA GGCGACGGGA TATGGTAATG CGAACAGCTA TCGTTATCGG TACGCAGGCA GTTCAACAGT GAACGTCTAT ACGGAAAACA TCGAAAAGGT CAGGTTGGCA AGGGGTGAAC TCAGTGATCT CGGCGCAAAG GGGGTGGCGA TTTCAGGAGA GAATTACCAG GCGCGTTCCG AGTACCTGTA TACACAACTC AACGAGGTTA AACCTGCGAT GATTGAAGAA GCAACCAGCA ACGCCAGAGC TGTCGCAGAA AAGTTTGCCG AAGACTCCGG CAGTCGTCTC GGCAAAATCA AGCGTGCCAG TCAAGGTCAG TTTTCCATAA TGGACAGAGA CAGCAATACC CCGTATATGA AAAAAGTAAG GGTTGTTTCA ACGCTGGAAT ATTATCTGGT TGACTAA
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Protein sequence | MHPFFITHVN YSGYVVSEGF TRFKAFERTV VVKGLAEREV SADIAIWPVT FTVAADDLSF LVATLQDQND VVVAFLRQKG IAQQEISVSA PSIIDRQATG YGNANSYRYR YAGSSTVNVY TENIEKVRLA RGELSDLGAK GVAISGENYQ ARSEYLYTQL NEVKPAMIEE ATSNARAVAE KFAEDSGSRL GKIKRASQGQ FSIMDRDSNT PYMKKVRVVS TLEYYLVD
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